DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-IIb and man2a1

DIOPT Version :9

Sequence 1:NP_001262614.1 Gene:alpha-Man-IIb / 41913 FlyBaseID:FBgn0026616 Length:1249 Species:Drosophila melanogaster
Sequence 2:NP_001163963.1 Gene:man2a1 / 100036612 XenbaseID:XB-GENE-961025 Length:1150 Species:Xenopus tropicalis


Alignment Length:1310 Identity:422/1310 - (32%)
Similarity:633/1310 - (48%) Gaps:228/1310 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KLFRR----GSARCIGLLSAFVTILLCLYYI----SIGQPNPTPISETGAPSAAL---------- 50
            ||.|:    |||       .|..::..||.:    ...||. :|..|...|...|          
 Frog     2 KLSRQITVLGSA-------IFCVVIFSLYLMLDRGQFDQPK-SPRREGALPKGQLSILQDKIDHL 58

  Fly    51 ------RGSPLSGLTGFSVDGGSSSIIHQQKQQLVIASNQKKSSETKSAQTSVSPEEQSEEQYTN 109
                  ....:|.:.. ||...|.|:...||.......::..||:.:.:..:..|....:.|:.:
 Frog    59 ERLLAENNEIISNIRD-SVINLSESVKDGQKNSDSQNFSRGSSSQLEPSAPAFLPINNEDCQFAS 122

  Fly   110 SNWGDKCYELIQSNTNITASEEHSKFDFQPEWMRSKEYWDRGFEERFDAQKKDKQRPPLKIIVVP 174
            ...|.|      ||..:....:...|| .|:    ...|.:||:..:|..:.|.:  ||::.:||
 Frog   123 VTGGHK------SNVQMLDVYDILPFD-NPD----GGVWKQGFDISYDEHEWDNE--PLQVFLVP 174

  Fly   175 HSHNDPGWLKTFTNYFQSDSRQILNLLVTKMQEYTDMTFIWSEISFLQLWWDQAHPTKQRALKRL 239
            ||||||||||||.:||:..::.|||.:|.|:||..:..|:|||||:...|||.....|:.|:|||
 Frog   175 HSHNDPGWLKTFDDYFRDQTQHILNNMVIKLQEDKNRKFMWSEISYFSKWWDGIDNQKKEAVKRL 239

  Fly   240 IDAGRIEITTGGWVMTDEANVHIYPMLDQLIEGHQWLKNNLNVTPKVGWSIDPFGHGSTVPYLLS 304
            |:..:.||.||||||.|||..|.:.::||||||||||:.||.|.||.||:||||||..|:.|:|.
 Frog   240 IELEQFEIVTGGWVMPDEATPHYFSLVDQLIEGHQWLEKNLGVKPKSGWAIDPFGHSPTMAYILK 304

  Fly   305 GANFEGTIIQRIHYAWKQWFARQQSGDFIWKPYWRSRKDKDSEAGSLLTHNMPFDIYSIKGSCGP 369
            .:.....:|||:||:.|::||.:|:.:|.|:..|......|     :|.|.|||..|.:..:|||
 Frog   305 SSGLSNMLIQRVHYSIKKYFASKQTLEFFWRQNWDLGHSTD-----ILCHMMPFYSYDVPHTCGP 364

  Fly   370 HPFICLNFDFRKIPGEYTE--YSVKAQFITDDNLESKAQLLLEQYARTASLFPHNVALIPVGDDF 432
            .|.||..|||:::||....  :.|..:.|.:.|::.:|.::|:||.:.:.|:...|.|:|:||||
 Frog   365 DPKICCQFDFKRLPGSRVSCPWRVPPEVINEGNVQHRAWMILDQYRKKSKLYRTKVLLVPLGDDF 429

  Fly   433 RYNKDREVDQQYQNYKKLIDHIMANRRLYNADIRFGTPSDYFEAIKERMKDHTP---GFPTFKGD 494
            ||....|.||||:||:||..::.::..|: ...:|||.||||:|:::......|   .||...||
 Frog   430 RYTDSLEWDQQYENYQKLFSYMNSHPELH-VKAQFGTISDYFKALRKAGNVDDPNSQSFPVLSGD 493

  Fly   495 FFVYSDIFSEGRPAYWSGYFTTRPFYKLLSSELEHQLRSAEIVFTLAYNTARQAKRENAIKIYEK 559
            ||.|:|....    |||||||:|||||.|...:|..||:|||:::.|.....:..:..:....| 
 Frog   494 FFTYADRDDH----YWSGYFTSRPFYKRLERVMESHLRAAEILYSFALVQMNKFDKLQSFPSVE- 553

  Fly   560 NYELIINARRNLGLFQHHDAITGTSKAAVMRDYAMRLFESTQNMVKMQESCLELLLQKGQ----- 619
            :|:|:..|||||||||||||||||:|..|:.||..|||.|..|:.::......:|:.|.:     
 Frog   554 HYKLLTEARRNLGLFQHHDAITGTAKDWVVVDYGTRLFHSLMNLKRVIIDAAHVLVLKDKDTYAY 618

  Fly   620 -PRHHGFLLSEFERDNFNKLPRKMPIQMANGDESTPTVPAGEGGAGGSSSSGSVGSFVLYNSLAQ 683
             |....|.:.:.:... :.||:|..|::..       :|.               ...:||...|
 Frog   619 NPSSPFFSMDDVQPSQ-DSLPQKTVIKITE-------IPR---------------YLTVYNPTEQ 660

  Fly   684 KRLEVVTLRVQHPNVKIVNDKGVELNHIQINPVWN-----ITDTYEQGLGTSVSGTVGRIRTSTR 743
            :|..||::.|....||:::..|..|. .||:.|||     :.|.|                    
 Frog   661 ERYSVVSVYVSSSKVKVISASGKALK-AQISAVWNGDSAPLQDMY-------------------- 704

  Fly   744 QFEVMFVAELEPLSLSTYRVQVDEVNFKRNIATIYCDDCTESQPASVSPPEEIESSPTSVFEARG 808
              :|.|:|.|..|.|:.|:: |:..|                       .|.|::..|...:.:.
 Frog   705 --QVSFLAYLPALGLAVYKL-VEAEN-----------------------SESIKADYTIFVQGKH 743

  Fly   809 K---------------PAGDIQLENPHMRLLFDEKSGFLKTITRKNQKKELLKPLQCNIKFAAYR 858
            |               ..||:.:||.:::|.| ..||.|:.|    |.||..|.....:.|..|.
 Frog   744 KNINSDGNFRIKEVNIVVGDVTIENTYLKLWF-SSSGLLEKI----QSKEDGKTHGVKVDFIWYG 803

  Fly   859 SA--QFHSGAYLFKTDPEQS---EAEKEVLEGYTDMRIIITSGPIASDVTVIYGPFLAHTVRIFN 918
            :.  :..||||||..|.|..   .|:..|:.        :|.|.|.|:| |::...|.||||::|
 Frog   804 TTNNRDKSGAYLFLPDGEAKPYINADPPVVR--------VTHGSIFSEV-VVFFKHLTHTVRLYN 859

  Fly   919 TRTHLDAAIYVENDIDFEPPPKNRETELFMRFVTNIDNIAQAPMQRDPLKEPVDAATMPELPVFY 983
            .......:..:.|.:|.. ...||  |:.||..::|::..:                      ||
 Frog   860 VHGLEGQSPEITNVVDIR-GEFNR--EIVMRITSDINSKHR----------------------FY 899

  Fly   984 SDQNGFQYHERIKVPAIGIEGNYFPITSGAFIQDSRLRLTLLTTHAQGAASYEPGQLEVMLDRRT 1048
            :|.||:|...|..:..:.|:.|.:|:||.|:|||...||||.:..:.|.||.:.|||||.||||.
 Frog   900 TDLNGYQIQPRRTLSKLPIQANVYPMTSMAYIQDDASRLTLHSAQSLGVASSKSGQLEVFLDRRL 964

  Fly  1049 LYDDYRGMGEGVVDSRLTRHKFWLLVEDLPG--GQHVTQPPSY-KVLSQQAQQLANALRYPPNLY 1110
            :.||.||:|:||.|:::|.:.|.||:|...|  .:...:|.|| .:||.......|....|  :.
 Frog   965 MQDDNRGLGQGVQDNKITSNLFRLLLEKRFGKDEKEDEKPVSYPSILSHITSMFLNHPVIP--MA 1027

  Fly  1111 FVSNLEQPELAAALLPLVRLLPKGPLPCDVHLTTLRTLSDPELQLFPSASALLVLHRQGFDCSVS 1175
            ..|:.....|..|.|||.     ..:||||||..|||: ..::...||..|.|:|||:||||..|
 Frog  1028 ATSDSGSSVLLNAFLPLT-----SSMPCDVHLLNLRTI-QAKVGPIPSDEAALILHRKGFDCKFS 1086

  Fly  1176 AGRELSMEAICPLSSKGLGNVQLGRL----SLHTIEATSLTGTEQKSSRESYHIRSLAEISLEPM 1236
             .::|.:     |.|...|.|.:.||    ::.::..:|||.....|:.     ::..||.:..|
 Frog  1087 -NKDLGL-----LCSTTQGKVSVHRLFNGFNIESLIPSSLTLMHSSSNS-----KNTTEIRISTM 1140

  Fly  1237 ELRTFNLTFR 1246
            :::||.:..|
 Frog  1141 DIKTFRIKLR 1150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IIbNP_001262614.1 PLN02701 148..1246 CDD:178304 388/1140 (34%)
GH38N_AMII_GMII_SfManIII_like 167..514 CDD:212120 156/351 (44%)
Alpha-mann_mid 508..596 CDD:286360 44/87 (51%)
Glyco_hydro_38C 813..1241 CDD:285047 139/439 (32%)
man2a1NP_001163963.1 PLN02701 130..1150 CDD:178304 392/1165 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 108 1.000 Domainoid score I6357
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1101882at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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