DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9593 and col11a2l

DIOPT Version :10

Sequence 1:NP_650493.2 Gene:CG9593 / 41912 FlyBaseID:FBgn0038365 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001005799.1 Gene:col11a2l / 448277 XenbaseID:XB-GENE-12564499 Length:340 Species:Xenopus tropicalis


Alignment Length:224 Identity:74/224 - (33%)
Similarity:102/224 - (45%) Gaps:15/224 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 AKSDCHE-LDEGVRVDGVYRFLVPERNEVQRDLYERYCAFATDGPAWTVIQSR-GGSFDPHENFN 213
            |..:|.| |:.||...|.|...:.....:     :..|...|||..|.|.|.| .||.|    |.
 Frog   126 AAKNCMELLNYGVLFTGWYTIYLDGNKPI-----KVLCDMDTDGGGWIVFQRRVDGSVD----FY 181

  Fly   214 RSWDEYRAGFGNLSRDFWFGNEFAHKILYRDDHELRIELQEAGEPLDWAEYPLFWLDSESYNYQL 278
            |.|..|:.|||:...:||.|||..|::....:.:||.:|::......:|.|..|.|:.||.||.|
 Frog   182 RDWKSYKQGFGSQLSEFWLGNENIHRLTSSGNFQLRFDLEDFDNNRTYATYSQFRLEPESQNYTL 246

  Fly   279 SVAGEFRGSLPDALEQHNRMDFSTYDRRRNHAKSADSTCGEDYGGGWWFDRCTQCNLNGEH--GV 341
            .......|...|:|..|....|||.|...:.|  :.:.|.|.|.|.||::.|....||||:  |.
 Frog   247 RFREFTGGPAGDSLFTHKDRAFSTKDADNDPA--SKTNCAERYKGAWWYESCYHSCLNGEYMRGQ 309

  Fly   342 HQRASPAIIWMNWRTGTDKPKSSRMMIRP 370
            |.:|...:.|..:|......|.|.|.:||
 Frog   310 HDKADGGVHWAKFRGVNYSLKVSEMKLRP 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9593NP_650493.2 FReD 150..371 CDD:238040 74/224 (33%)
col11a2lNP_001005799.1 Collagen 48..110 CDD:460189
FReD 128..338 CDD:238040 71/220 (32%)
Blue background indicates that the domain is not in the aligned region.

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