DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9593 and sca

DIOPT Version :9

Sequence 1:NP_650493.2 Gene:CG9593 / 41912 FlyBaseID:FBgn0038365 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster


Alignment Length:436 Identity:106/436 - (24%)
Similarity:173/436 - (39%) Gaps:129/436 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KSLEELVLIRKTLAAQA---------LKLRGLEINLHRV------------------LSKVVLLA 71
            :.:.:|.|.::.|..|.         .::|.:|:..||:                  .|.:.||.
  Fly   328 EQIHQLQLAQRNLRRQVNGLRFHHIDERVRSIEVEQHRIANANFNLSSQIASLDKLHTSMLELLE 392

  Fly    72 D----------AVVQVPGRYSSKEDPLAVLSERLNLLLER----------------LNQEER--- 107
            |          ::.::....|..|...|.::...:|:.|.                :.||||   
  Fly   393 DVEGLQTKMDKSIPELRHEISKLEFANAQITSEQSLIREEGTNAARSLQAMAVSVSVLQEEREGM 457

  Fly   108 --ISTNLLELK------------EWSTKVC-------------------QEPSP-----SQTLPK 134
              :|.|:.:|:            |...|:.                   |:.||     ::||..
  Fly   458 RKLSANVDQLRTNVDRLQSLVNDEMKNKLTHLNKPHKRPHHQNVQAQMPQDDSPIDSVLAETLVS 522

  Fly   135 ELTEEKDEPKVD-FYQPAKSDCHELDEGVRVDGVYRFLVPERNEVQRDLYERYCAFATDGPAWTV 198
            ||  |..|.:.: .......||.|:.  .:.||:: .:.|..   ||.....:|  ..||  ||.
  Fly   523 EL--ENVETQYEAIINKLPHDCSEVH--TQTDGLH-LIAPAG---QRHPLMTHC--TADG--WTT 575

  Fly   199 IQSRGGSFDPHENFNRSWDEYRAGFGNLSRDFWFGNEFAHKILYRDDHELRIELQEAGEPLDWAE 263
            :|.|   ||...:|||||.:|..|||....:||.|||..|.:...:...|::::|:..:.:..||
  Fly   576 VQRR---FDGSADFNRSWADYAQGFGAPGGEFWIGNEQLHHLTLDNCSRLQVQMQDIYDNVWVAE 637

  Fly   264 YPLFWLDSESYNYQLSVAGEFRGSLPDALEQHNRMDFSTYDRRRNHAKSADSTCGEDYGGGWWFD 328
            |..|::.|.:..|:|.:| |:.|:..|||.....|.||..|..|:   .:.:.|..:|.|||||.
  Fly   638 YKRFYISSRADGYRLHIA-EYSGNASDALNYQQGMQFSAIDDDRD---ISQTHCAANYEGGWWFS 698

  Fly   329 RCTQCNLNGEHGVHQRASPAIIWMN-----WRTGTDKPKSSRMMIR 369
            .|...||||.:.:      .:.|.:     |..    .|||||:::
  Fly   699 HCQHANLNGRYNL------GLTWFDAARNEWIA----VKSSRMLVK 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9593NP_650493.2 FReD 150..371 CDD:238040 71/225 (32%)
scaNP_476710.2 PRK13923 <200..300 CDD:276343
FBG 538..736 CDD:214548 71/224 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14151
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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