DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ttc26 and Ttc26

DIOPT Version :9

Sequence 1:NP_650486.1 Gene:Ttc26 / 41905 FlyBaseID:FBgn0038358 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001020216.1 Gene:Ttc26 / 500086 RGDID:1561363 Length:554 Species:Rattus norvegicus


Alignment Length:571 Identity:300/571 - (52%)
Similarity:406/571 - (71%) Gaps:33/571 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MILSRGKTDSASSRNASGGPGSGLGV-GRQARKTPAPASLEDFIIRRDYTGARAFLEFANDDEDE 64
            |:|||.|.       |.||....... .::.||.|   .|||.:.:||:|||...|||.....::
  Rat     1 MMLSRAKP-------AVGGESPHTDKRKKKGRKIP---KLEDLLSQRDFTGAITLLEFKRHVGEQ 55

  Fly    65 EEGAHGSKQSQVDQWIAFCNFHLGDYQQALAQYK-AIQQGSSTPDGKLDLNLAVCMFYLGLYEEA 128
            ||        ..:.||.:|.||||||::||.:|: |.::.:..|:  :.:|||...|:||:|::|
  Rat    56 EE--------DTNLWIGYCAFHLGDYKRALEEYENAAKEENCNPE--VWVNLACTYFFLGMYKQA 110

  Fly   129 QQLMANAADNPLKQRLLFHLAHKLGNEEEWSQLQEELQDSSSLEQQLSLASMHYMRAHYQEAIDV 193
            :.....|..:.|:.|||||||||..:|::.....:.|||..  |.||||||:||||:|||||||:
  Rat   111 EAAGFKAPKSRLQNRLLFHLAHKFNDEKKLMNFHQNLQDIK--EDQLSLASIHYMRSHYQEAIDI 173

  Fly   194 YKRVLVDNKEYQAINVYLALCFYKLDYYDMSQEVLDVYLSQHGDSTIAINLKACNRFRLFNGRVA 258
            |||:|:||:||.|:|||:|||:|||||||:|||||.|||.|..|||||:||||||.|||:||:.|
  Rat   174 YKRILLDNREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLKACNHFRLYNGKAA 238

  Fly   259 EQEIKNIADNGT----FGADLLRHNLVVFRNGEGALRVLPGLLNIIPEARLNLAIYYLKQGDVQE 319
            |.|:|::.||.:    |..:|:||||||||.|||||:|||.|:::||||||||.||||:|.||||
  Rat   239 EAELKSLMDNASSPFEFAKELIRHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLRQDDVQE 303

  Fly   320 AHALMKELQPTSPHEYILKGVVHAALGQQLGSKEHIKTAQQNLHLVGSSATECDTIPGRQSMASA 384
            |:.|:|:|:||:|.||||||||:|||||::||::|:|.|||...|||.||:|||||||||.|||.
  Rat   304 AYNLIKDLEPTTPQEYILKGVVNAALGQEMGSRDHMKIAQQFFQLVGGSASECDTIPGRQCMASC 368

  Fly   385 FFLYEQFEEVLVYMNSIRSYFVNDDVFNYNFAQAKCATGYYKEAEELLMQISDMDIKNQHTYCMI 449
            |||.:||::||:|:||.:|||.|||:||:|:||||.|||...|.||:.:.|....:||.:.|...
  Rat   369 FFLLKQFDDVLIYLNSFKSYFYNDDIFNFNYAQAKAATGNTSEGEEVFLLIQSEKLKNDYIYLSW 433

  Fly   450 LAKCHIHCGHPELAWNVFITRDTNAEAFILLQLIANECYKCAEFWVAAKAFDMLEKLDPSPENWE 514
            ||:|:|....|.|||.:::..:|:.|:|.|||||||:|||..:|:.:|||||:||:|||:||.||
  Rat   434 LARCYIMNKKPRLAWELYLKMETSGESFSLLQLIANDCYKMGQFYYSAKAFDVLERLDPNPEYWE 498

  Fly   515 GKRGACAGVLFALCTKAQRGR-PGGGISEVIGILRDSSNSQAEAMIKTIRK 564
            ||||||.|:...:..    || |...:.||:.:||.:.|:|.|.:|:.::|
  Rat   499 GKRGACVGIFQMILA----GREPKETLREVLHLLRSTGNTQVEYIIRIMKK 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ttc26NP_650486.1 PEP_TPR_lipo <85..>358 CDD:274350 165/277 (60%)
TPR repeat 107..133 CDD:276808 9/25 (36%)
PPR repeat 380..404 CDD:276811 13/23 (57%)
PPR repeat 410..438 CDD:276811 14/27 (52%)
Ttc26NP_001020216.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 8/26 (31%)
ANAPC3 35..113 CDD:289650 27/78 (35%)
TPR 1 57..90 10/32 (31%)
TPR repeat 58..86 CDD:276809 5/27 (19%)
TPR 2 92..125 11/33 (33%)
TPR repeat 139..178 CDD:276809 18/38 (47%)
TPR 3 151..184 14/32 (44%)
TPR repeat 184..214 CDD:276809 21/29 (72%)
TPR repeat 219..247 CDD:276809 21/27 (78%)
TPR 4 468..501 17/32 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341001
Domainoid 1 1.000 520 1.000 Domainoid score I295
eggNOG 1 0.900 - - E1_KOG3785
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11786
Inparanoid 1 1.050 581 1.000 Inparanoid score I984
OMA 1 1.010 - - QHG56353
OrthoDB 1 1.010 - - D206542at33208
OrthoFinder 1 1.000 - - FOG0006640
OrthoInspector 1 1.000 - - oto98081
orthoMCL 1 0.900 - - OOG6_103950
Panther 1 1.100 - - LDO PTHR14781
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4871
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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