DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4520 and TOM40

DIOPT Version :9

Sequence 1:NP_001287340.1 Gene:CG4520 / 41902 FlyBaseID:FBgn0038355 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_013930.1 Gene:TOM40 / 855243 SGDID:S000004816 Length:387 Species:Saccharomyces cerevisiae


Alignment Length:321 Identity:63/321 - (19%)
Similarity:119/321 - (37%) Gaps:59/321 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YKNSELGIFFPDCFERVSGH---CNKKNPGNVQNLHILAHR---VMPKFYDGIELDYLHRLAPNK 67
            :.::.:..|..|.::::..|   ....|||.|:||:....|   :...|:.|:..|.....:.| 
Yeast    32 FSSNPISSFVVDTYKQLHSHRQSLELVNPGTVENLNKEVSRDVFLSQYFFTGLRADLNKAFSMN- 95

  Fly    68 YITAAWVLSHIRPSG------FRFGGLYTFRVQDDTMYTPTIMGDI-HPTSLAANLNILYYPFQS 125
               .|:..||....|      :.|..|:.    :|.::.   .|:| :..|::..||   |.:..
Yeast    96 ---PAFQTSHTFSIGSQALPKYAFSALFA----NDNLFA---QGNIDNDLSVSGRLN---YGWDK 147

  Fly   126 LRMEAV-LQ----KAREAAVESQY-TIEWTRPCDTWTANFYNVRNESGRCTMSVMRSVSAHWALG 184
            ..:..| ||    :.....:|..| ..:::....|...:|......:|....|.::||:...|||
Yeast   148 KNISKVNLQISDGQPTMCQLEQDYQASDFSVNVKTLNPSFSEKGEFTGVAVASFLQSVTPQLALG 212

  Fly   185 GELLLEWNDPQKLTPDLALAARYSHY-----NYSLAATASRQG-LDVTYWQRIHPHIQMA----- 238
            .|.|....|..  .|..|..:..:.|     ::..:......| |..:.|:::..:::..     
Yeast   213 LETLYSRTDGS--APGDAGVSYLTRYVSKKQDWIFSGQLQANGALIASLWRKVAQNVEAGIETTL 275

  Fly   239 ---------NLLAWNRNTRKTI---ATICYQWNFWNSAVHGMFDSDASVG-FMWTKYLTHL 286
                     .|:......:.|:   .||..::.:..|...|..||:..|. |:..|.|..|
Yeast   276 QAGMVPITDPLMGTPIGIQPTVEGSTTIGAKYEYRQSVYRGTLDSNGKVACFLERKVLPTL 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4520NP_001287340.1 Porin3_Tom40 33..312 CDD:132766 60/294 (20%)
TOM40NP_013930.1 Porin3_Tom40 57..360 CDD:132766 60/296 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345433
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3296
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1946
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.750

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