DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4520 and tomm40l

DIOPT Version :10

Sequence 1:NP_650483.1 Gene:CG4520 / 41902 FlyBaseID:FBgn0038355 Length:320 Species:Drosophila melanogaster
Sequence 2:XP_031746850.1 Gene:tomm40l / 100496551 XenbaseID:XB-GENE-958939 Length:307 Species:Xenopus tropicalis


Alignment Length:294 Identity:70/294 - (23%)
Similarity:117/294 - (39%) Gaps:27/294 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NPGNVQNLHILAHRVMPKFYDGIELDYLHRLAPNKYITAAWVLSH------IRPSGFRFGGLYTF 91
            |||:...||.....|.|:..:|:      :|..||.:::.:.:||      :..|.:.|...|..
 Frog    25 NPGSFDELHRSCKEVFPQQMEGV------KLIINKPLSSHFQVSHSIHMSTVGQSSYHFNAKYVG 83

  Fly    92 RVQDDTMYT-PTIMGDI-HPTSLAANLNILYYPFQSLRMEAVLQKAREAAVESQYTIEWTRPCDT 154
            ..|.....| |.:.||: :..||.|.::.|.  ....|.:||.|..|...:..|...|:.....|
 Frog    84 DYQPSPTETFPMLTGDVDNAGSLNAQIHCLL--ADRFRSKAVFQTYRSKFLTWQVDGEYRGDDCT 146

  Fly   155 WTANFYN--VRNESGRCTMSVMRSVSAHWALGGELLLEWNDPQKLTPD---LALAARYSHYNYSL 214
            .|....|  :.|||.......::|::....|||||:..    |::..:   ..:|.:||..|:..
 Frog   147 VTLTLGNPDILNESVILVTHFLQSITPRLVLGGELVYH----QRMGEEGAIFTMAGKYSAPNWVA 207

  Fly   215 AATASRQGLDVTYWQRIHPHIQMANLLAWNRNTRKTIATICYQWNF--WNSAVHGMFDSDASVGF 277
            .......|...:|:.|.:..|.:...|..|...::|.....|..:.  .|....|..|:...||.
 Frog   208 TLNIGYGGAHASYYHRANEQIHVGVELEANTRLQETSFAFGYHLDIPKANVVFKGSVDNSWCVGG 272

  Fly   278 MWTKYLTHLPLQMGFSVVMNLPTDRFAFGMRFVL 311
            :..|.|..||:.:.....||...::|..|...::
 Frog   273 ILEKKLPPLPVTLALGAFMNHWKNKFHCGFNIMV 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4520NP_650483.1 Porin3_Tom40 33..312 CDD:132766 70/294 (24%)
tomm40lXP_031746850.1 Porin3_Tom40 23..307 CDD:132766 70/294 (24%)

Return to query results.
Submit another query.