DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5404 and AST56

DIOPT Version :10

Sequence 1:NP_650482.1 Gene:CG5404 / 41901 FlyBaseID:FBgn0038354 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_565165.2 Gene:AST56 / 844134 AraportID:AT1G77990 Length:677 Species:Arabidopsis thaliana


Alignment Length:628 Identity:151/628 - (24%)
Similarity:285/628 - (45%) Gaps:102/628 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 AGKAPRMNKWKRR--------LHRHVPVFQWLPLYSTEWGIDDFIAGITLGLTIIPESMACALLA 88
            |.|..:.||.|..        |....|:..|...|.......|.:||:||....||:|:..|.||
plant    68 AKKKHKRNKTKNSSSNLVYSCLKSAFPILSWGRQYKLNLFKKDLMAGLTLASLCIPQSIGYANLA 132

  Fly    89 GLPARYGLCSAFIGPLIYMVFGSIDKVIIGPTSLVALV------SVQFTVGRPIEF---AFLLTF 144
            ||...|||.::.:.||||...|:..::.|||.::|:|:      .:|..|..||.:   .|.:||
plant   133 GLDPEYGLYTSVVPPLIYSTMGTSRELAIGPVAVVSLLLSSMVRDLQDPVTDPIAYRKIVFTVTF 197

  Fly   145 LSGIVQIIMGTMRMGFIFEFISMPVIKAFSSATAILVIESQLKVLLGIKYL-----VAGLMNSVG 204
            .:|..|.|.|..|:||:.:|:|...:..|.:..||::...|||.|.|:.:.     |..:::|| 
plant   198 FAGAFQAIFGLFRLGFLVDFLSHAALVGFMAGAAIVIGLQQLKGLFGLTHFTNKTDVVSVLSSV- 261

  Fly   205 MLSSRIEESNMADLIMGVCAIVFLLLLELLDRVANNEKRNKILRIFCRYLSTSRNTLIVLIAAIV 269
             ..|........:.::|...::|:||...:     .::.||:.     ::......:.|::|.::
plant   262 -FHSLHHPWQPLNFVIGSSFLIFILLARFI-----GKRNNKLF-----WIPAMAPLISVVLATLI 315

  Fly   270 SFIWIQKCGQVPYALSKNALSTLPNFTVPSFHIETAERNYSIWEV-LKELNIGII-----VIPIV 328
            .::             .||.|.......   ||:......|:.:: .|..::|.|     :..|:
plant   316 VYL-------------SNAESRGVKIVK---HIKPGFNQLSVNQLQFKSPHLGQIAKIGLISAII 364

  Fly   329 GILTNISIGK--LTPKGL-VDTNQELLTVGLCNMFGSCVQAMPSSGAFTRYAISTACGLRTPMAN 390
            .:...|::|:  .|.||. :|.|:|::.:|..|:.||......::|:|:|.|::.:.|..|.::|
plant   365 ALTEAIAVGRSFATIKGYRLDGNKEMMAMGFMNIAGSLSSCYVATGSFSRTAVNFSAGCETVVSN 429

  Fly   391 LYLGIIVLLALSYLSPYFNYIPEATLAAILICSIFTLLDFKLPMRLWRDSKRDFATWLLCFCVSV 455
            :.:.|.|:::|..|:.:..:.|.|.||:|::.::..|:|....:.:|:..|.||...:..| ..|
plant   430 IVMAITVMISLEVLTRFLYFTPTAILASIILSALPGLIDVSGALHIWKLDKLDFLVLIAAF-FGV 493

  Fly   456 LF-GVEVGLFVSIVVTALHLLFLWARPEIRV--KIEQLDEM----QYIRVTPSNGIY-------- 505
            || .||:||.:::.::...::....||.|..  ::.:.|..    ||.....:.|:.        
plant   494 LFASVEIGLLLAVGISFARIMLSSIRPSIEALGRLSKTDIFGDINQYPMANKTAGLLTLRISSPL 558

  Fly   506 --FPAINYLRERVLKACEQADFR------------ITVVIDGQRISGMDYTAAQGISKLSSDLCR 556
              |...|::|:|:|.:.::.:..            ..|::|...:.|:|.:....:.:|..:|  
plant   559 LCFANANFIRDRILNSVQEIEGEENEQEVLKENGLQVVILDMSCVMGVDTSGVFALEELHQEL-- 621

  Fly   557 QADASSSTLLIL----FRFPEHLQRL-ID---NTDNLVFCESE 591
               ||:...|::    :|....|:|. :|   .|:|:.....|
plant   622 ---ASNDIRLVIASPRWRVLHKLKRAKLDEKIKTENIYMTVGE 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5404NP_650482.1 PRK11660 50..557 CDD:481320 135/558 (24%)
AST56NP_565165.2 sulP 94..662 CDD:273284 145/602 (24%)

Return to query results.
Submit another query.