DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5404 and slc26a4.3

DIOPT Version :10

Sequence 1:NP_650482.1 Gene:CG5404 / 41901 FlyBaseID:FBgn0038354 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001107135.1 Gene:slc26a4.3 / 779605 XenbaseID:XB-GENE-950380 Length:778 Species:Xenopus tropicalis


Alignment Length:654 Identity:161/654 - (24%)
Similarity:280/654 - (42%) Gaps:148/654 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PVFQWLPLYS-TEWGIDDFIAGITLGLTIIPESMACALLAGLPARYGLCSAFIGPLIYMVFGSID 113
            ||..|||.|. .||.::|.|:|::.||....:.:|.||||.:|..|||.|:|...|.|...|:..
 Frog    66 PVLDWLPKYRWKEWFVNDLISGVSTGLVGTLQGLAFALLAAVPVGYGLYSSFFPILTYFFLGTSK 130

  Fly   114 KVIIGPTSLVALV--SVQFTVGRPIEFAFL--------------------------LTFLSGIVQ 150
            .:.:||..:|:|:  ||..::....:||.|                          |:||.||:|
 Frog   131 HISVGPFPVVSLMVGSVVLSIAPDEKFAILGNATGLNKTIIDTVARDAARIAVSGTLSFLIGIIQ 195

  Fly   151 IIMGTMRMGFIFEFISMPVIKAFSSATAILVIESQLKVLLGIKYLVAGLMNSVGMLS-------- 207
            :.:|..::|||..:::.|::..|::|.|..|..||.|::|.:.     ..|..|:||        
 Frog   196 LALGIFQIGFIVRYLADPLVGGFTTAAAFQVFVSQFKLVLNVP-----TQNYNGVLSIIYTIRDI 255

  Fly   208 -SRIEESNMADLIMGVCAIVFLLLLELLDRVANNEKRNKILRIFCRYLSTSRNTLIVLIAAIVSF 271
             ..|..:|:||||.|:...|..::::.:     |::..:|.|:     ......::.::|..:| 
 Frog   256 FMNIRLTNIADLIAGLLTFVVCVVVKEI-----NDRYKRIFRV-----PIPIEVIVTIVATGIS- 309

  Fly   272 IWIQKCGQVPYALSKNA------LSTLPNFTVPSFHIETAERNYSIWEVLKELNIGIIVIPIVGI 330
                      |.::.:|      ::|:|:..:|....:.:        :..::......|.||..
 Frog   310 ----------YGVNLHAKYNAGIVATIPSGFIPPMTPDVS--------LFSQIGSSAFSIGIVAY 356

  Fly   331 LTNISIGKL--TPKGL-VDTNQELLTVGLCNMFGSCVQAMPSSGAFTRYAISTACGLRTPMANLY 392
            ...:|:||:  |.... ||.|||.:..|:.|:||.......::.|.:|.|:..:.|.||.:|.:.
 Frog   357 AVAVSVGKVYATKHNYEVDGNQEFIAFGISNLFGGAFSCFCATTALSRTAVQESTGGRTQIAGII 421

  Fly   393 LGIIVLLALSYLSPYFNYIPEATLAAILICSIFTLL--DFKLPMRLWRDSKRDFATWLLCFCVSV 455
            ...|||:|:..|......:.::.||||:|.::..:.  .|.:| |||:.:|.|.|.|:.....|:
 Frog   422 SAGIVLIAIVALGRLLEPLQKSVLAAIVIANLKGMFWQVFDIP-RLWKQNKWDSAIWVFTCIASI 485

  Fly   456 LFGVEVGLFVSIVVTALHLLFLWARPEIRVKIEQLDEMQYIRVTPSNGIYFPAINYLRERVLKAC 520
            ..|::.||...       |||..|...:||:......:..:   |...||         :.:|  
 Frog   486 FLGLDSGLLAG-------LLFGLATILLRVQFPSCGALGNV---PGTDIY---------KNVK-- 529

  Fly   521 EQADFRITVVIDGQRI----SGMDYTAAQGI-----SKLSSDLCRQADASSSTLLILFRFPEHLQ 576
               :::..:..:|.:|    |||.|....|.     |.:..|..:..:..:..|       ..:|
 Frog   530 ---EYKNLIEPEGVKIIRHTSGMFYGNIDGFKNAIKSIVGFDPVKVYNKRTKAL-------RKIQ 584

  Fly   577 RLI---------------DNTDNLVFCESENKVKEFLTQESLRNGYINLKEHIRASID----LGY 622
            :||               ..|||..| |.:..|::   .|...||.:..|| :...:|    |..
 Frog   585 KLIKKGQLRSTKNGVISNTGTDNEGF-EPDEDVED---PEQENNGAVQTKE-VEIQVDWNSELPV 644

  Fly   623 KIDI 626
            ||.:
 Frog   645 KISV 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5404NP_650482.1 PRK11660 50..557 CDD:481320 142/564 (25%)
slc26a4.3NP_001107135.1 PRK11660 66..723 CDD:481320 161/654 (25%)

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