DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5404 and slc26a3.1

DIOPT Version :10

Sequence 1:NP_650482.1 Gene:CG5404 / 41901 FlyBaseID:FBgn0038354 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001129155.1 Gene:slc26a3.1 / 563962 ZFINID:ZDB-GENE-041210-180 Length:745 Species:Danio rerio


Alignment Length:722 Identity:170/722 - (23%)
Similarity:303/722 - (41%) Gaps:180/722 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SEAGKAPRMNKWKRRLHRHV-------------------------------PVFQWLPLYS-TEW 62
            |.|.:..|:|:.::.|..|:                               |...|:..|. .||
Zfish    19 SFAEQHERINRKRKTLRHHLKDYFSGVSFSKLCLCCSCDAKRAKNAALSLFPFIGWMKDYKIKEW 83

  Fly    63 GIDDFIAGITLGLTIIPESMACALLAGLPARYGLCSAFIGPLIYMVFGSIDKVIIGPTSLVALV- 126
            .:.|.::||:.||..:.:.:|.:|||.||..|||.:||...:||...|:...:.:|...:::|: 
Zfish    84 LLGDIVSGISTGLVAVLQGLAFSLLASLPPGYGLYTAFFPAIIYFFLGTSRHLSVGAFPILSLMV 148

  Fly   127 -----------SVQFTV----GRPIE-----FAFLLTFLSGIVQIIMGTMRMGFIFEFISMPVIK 171
                       ...|.:    |..:|     .|..:|||.|..|::||.:::|||..::|..::.
Zfish   149 GAVVTRLVPDEGPSFNITGFEGLSLEQQRVLVASSVTFLMGAFQLVMGLLQVGFIVMYLSETLVS 213

  Fly   172 AFSSATAILVIESQLKVLLGIKYLVAGLMNSVGML------SSRIEESNMADLIMGVCAIVFLLL 230
            .|::|.|:.::.|||:.:||:.:  .|:...:.::      .|||..:|:|||:..:..:..:|:
Zfish   214 GFTTAAAVHILVSQLRFVLGLDF--PGINGPLAIIYTLVEVFSRITSTNVADLVTSIAIMALVLI 276

  Fly   231 L-ELLDRVANNEKRNKILRIFCRYLSTSRNTLIVLIAAIVSFIWIQKCGQVPYALSKNALSTLPN 294
            : |:.||.                  .|:..:.:.|..|::.|   .|| |.||.         |
Zfish   277 VKEINDRF------------------KSKLPVPIPIEVIMTVI---ACG-VSYAF---------N 310

  Fly   295 FTVPSFHIETAERNYSI-----------------WEVLKELNIGIIVIPIVGILTNISIGK---L 339
            |          |..:.:                 .||::|..:....:.|||.....|:.|   :
Zfish   311 F----------EERFDVVIVGEMVNGYESPVAPNLEVIEETAVEAFPMAIVGFAVAFSVAKVYSV 365

  Fly   340 TPKGLVDTNQELLTVGLCNMFGSCVQAMPSSGAFTRYAISTACGLRTPMANLYLGIIVLLALSYL 404
            .....:|.||||:..|:.||||:..::..:|.|.:|.||..:.|.:|.:|.:...::||:.:..:
Zfish   366 KHDYTIDGNQELIAFGVSNMFGASFRSFAASTALSRTAIQESTGGKTQIAGILSAMMVLIVIVGV 430

  Fly   405 SPYFNYIPEATLAAILICSI-FTLLDF-KLPMRLWRDSKRDFATWLLCFCVSVLFGVEVGLFVSI 467
            ......:|.:.|.|::|.:: ..|:.| :||. |||:.:.||.||::.|..|:..|:::||.|.|
Zfish   431 GFLLEPLPRSVLGALVIVNLKGMLMQFSELPF-LWRNDRPDFVTWMVTFMASLFLGLDLGLAVGI 494

  Fly   468 VVTALHLLFLWARPEIRVKIE------QLDEMQYIRVTPSNG---------IYFPAINYLRE--- 514
            ......:::....|...|...      ..|...|..:...:|         |:|..|::.|:   
Zfish   495 GAELFTVVYRTQFPRCSVLANISGTDLYRDRKDYTSIYEPDGVKIFKIPSPIFFANIDFFRDKLV 559

  Fly   515 --------RVLKACEQADFRI-TVVIDGQ----------RISGMDYTAAQGISKLS-----SDLC 555
                    ||||...:|..:| .::.:|:          |...:| |:...:..|.     |||.
Zfish   560 QEVGFNPMRVLKKRNKALRKIRKMLCNGELEVSDRGPVLRQPSVD-TSEGSMEDLDQPIDFSDLP 623

  Fly   556 RQADASSSTLLILFRFPEHLQRLIDNTDNLVFCESENKVKEFLTQESLRNGYINLKEHIRASIDL 620
            .|.:.:|.....:...|.::..||     |.||     ...|:...:|:.....|||.||..:|:
Zfish   624 IQVNWNSQLPANISVPPVNIHSLI-----LDFC-----AVSFIDVSALKGLKATLKEFIRIEVDV 678

  Fly   621 GYKIDID 627
             |.:..|
Zfish   679 -YIVSCD 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5404NP_650482.1 PRK11660 50..557 CDD:481320 146/599 (24%)
slc26a3.1NP_001129155.1 PRK11660 70..713 CDD:481320 164/671 (24%)

Return to query results.
Submit another query.