DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5404 and slc26a3.2

DIOPT Version :10

Sequence 1:NP_650482.1 Gene:CG5404 / 41901 FlyBaseID:FBgn0038354 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001035265.1 Gene:slc26a3.2 / 563896 ZFINID:ZDB-GENE-041210-179 Length:762 Species:Danio rerio


Alignment Length:656 Identity:154/656 - (23%)
Similarity:288/656 - (43%) Gaps:114/656 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VPVFQWLPLYS-TEWGIDDFIAGITLGLTIIPESMACALLAGLPARYGLCSAFIGPLIYMVFGSI 112
            :||..|:.:|| .||.::|.::|::.||..:.:.:|.:|||.:...|||.:||...:||...|:.
Zfish    58 LPVIGWMKIYSIKEWLLNDIVSGVSTGLVAVLQGLAFSLLASISTWYGLYAAFFPVIIYFFLGTS 122

  Fly   113 DKVIIGPTSLVAL-VSVQFT-----VGRPIEF-AF--------------LLTFLSGIVQIIMGTM 156
            ..:.:|...:::| |....|     .|.|... ||              .||||.|:.|:.||.:
Zfish   123 RHISVGAFPVLSLMVGAVVTKLVPDEGPPANITAFEGLTKEEQRILVSASLTFLVGLFQLGMGLL 187

  Fly   157 RMGFIFEFISMPVIKAFSSATAILVIESQLKVLLGIKYLVAGLMNSVGML------SSRIEESNM 215
            ::|||..::|.|.|..|::|.|:.::.||||.:||:  .|.|....:.::      .::|..:|:
Zfish   188 QVGFIVMYLSEPYISGFTTAAAVHILVSQLKFILGL--TVPGFSGPLSIIYTLESVFTQITSTNI 250

  Fly   216 ADLIMGVCAIVFLLLL-ELLDRVANNEKRNKILRIFCRYLSTSRNTLIVLIAAIVSFIWIQKCGQ 279
            .||:..:..:|.:|.: |:.||.                  .|:..:.:.|..|::.|   .|| 
Zfish   251 HDLVTSIVVMVAVLAVKEINDRF------------------KSKLPVPIPIEVIMTII---ACG- 293

  Fly   280 VPYALS------KNALSTLPNFTVPSFHIETAERNYSIWEVLKELNIGIIVIPIVGILTNISIGK 338
            |.||.:      .:.:..:||    :|....|..    .:|.:...:....|.|||.....::.|
Zfish   294 VSYAFNFRDNHGVDVVGKIPN----TFESPIAPD----LQVFQMAAVDAFPIAIVGFAVAFAVAK 350

  Fly   339 ---LTPKGLVDTNQELLTVGLCNMFGSCVQAMPSSGAFTRYAISTACGLRTPMANLYLGIIVLLA 400
               :....::|.||||:..|..|:||...:|:.:|.|.:|.|:..:.|.:|.:|.|...||||:.
Zfish   351 VYSVKHDYIIDGNQELIAFGASNIFGGSFKALAASTALSRSAVQESTGGKTQIAGLLSAIIVLVV 415

  Fly   401 LSYLSPYFNYIPEATLAAILICSIFTLL--DFKLPMRLWRDSKRDFATWLLCFCVSVLFGVEVGL 463
            :..:......:|::.|.|::|.::..:|  ...:|. ||:..:.|...|:.....:::.|:::||
Zfish   416 ILGIGFLLEPLPKSVLGAVVIVNLKGMLMQVVTVPY-LWKKDRPDCIVWVGTCLAAIILGLDIGL 479

  Fly   464 FVSIVVTALHLLFLWARPEIRVKIE------QLDEMQYIRVTPSNG---------IYFPAINYLR 513
            .|.:.:..|.::|....|...|...      ..|...||.:....|         |:|..|.:.|
Zfish   480 AVGLGLEFLTVVFRAQFPRCCVLANIPGTDIYRDRKHYINIFEPEGVKIFRIPSPIFFANIEFFR 544

  Fly   514 E-----------RVLKACEQADFRITVVIDGQRI----SGMDYTAAQGISKL-----SSDLCRQA 558
            :           |:|:...:|..:|..::....:    :|:..|....|.:.     :.||.:..
Zfish   545 DKLKDAVGFNPLRILRKRNKAVKKIKKMLKKGELTLTSNGLQTTCLMPIEESEYDSNADDLDQPT 609

  Fly   559 DASSSTLLILF--RFPEHLQRLIDNTDNLVFCESENKVKEFLTQESLRNGYINLKEHIRASIDLG 621
            |.:...:.|.:  ..|.::.....|..:|:.   :.....|:...:::.....:||.||..:|: 
Zfish   610 DYTDLPIQINWNAELPANISVPPVNIHSLIL---DFSAVSFIDISAIKGLKAAIKEFIRIDVDV- 670

  Fly   622 YKIDID 627
            |.:..|
Zfish   671 YIVGCD 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5404NP_650482.1 PRK11660 50..557 CDD:481320 141/581 (24%)
slc26a3.2NP_001035265.1 PRK11660 59..705 CDD:481320 154/655 (24%)

Return to query results.
Submit another query.