DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5404 and Prestin

DIOPT Version :9

Sequence 1:NP_650482.1 Gene:CG5404 / 41901 FlyBaseID:FBgn0038354 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_649024.1 Gene:Prestin / 39996 FlyBaseID:FBgn0036770 Length:742 Species:Drosophila melanogaster


Alignment Length:655 Identity:141/655 - (21%)
Similarity:247/655 - (37%) Gaps:192/655 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VPVFQWLPLYSTEWGI-DDFIAGITLGLTIIPESMACALLAGLPARYGLCSAFIGPLIYMVFGSI 112
            :|:.||||.||....: .|.|||.|:.:..||..||..:|||:.|..||..|....|.||..|:.
  Fly    81 IPILQWLPQYSPRRDLPGDIIAGFTVAIMNIPHGMAYGILAGVSAGNGLYMAVFPVLAYMFLGTS 145

  Fly   113 DKVIIGPTSLVALV----------------------------------------------SVQFT 131
            ..:.||..::.:::                                              ||..|
  Fly   146 KHISIGTFAVASMMTAKVVDTYANVDDHHQILPINAFGLQSNGTATASPLLLINSSALADSVSST 210

  Fly   132 VGRP---------------IEFAFLLTFLSGIVQIIMGTMRMGFIFEFISMPVIKAFSSATAILV 181
            ...|               ||.|..|....|||.::|..:|:|.:...:|.|::..|::|.|..|
  Fly   211 TISPFQLLNSTLNADPITKIEVATSLALTVGIVNLLMAFLRLGTLSSLLSEPLVNGFTTAAACHV 275

  Fly   182 IESQLKVLLGIK-----------YLVAGLMNSVGMLSSRIEESNMADLIMGVCAIVFLLLLELLD 235
            :.:|||.:|||.           |.|..::..|       .::|:.:....:..|.|:::.    
  Fly   276 VTAQLKDVLGISVPRHKGAFKIIYTVIDVIKGV-------PQTNLVNFGFCMAVIAFMMIC---- 329

  Fly   236 RVANNEKRNKILRIFCRYLSTSRNTLIVLIAAIVSFIW--------IQKCGQVPYALSKNALSTL 292
                ||.....|...||:...:.  ||::|...:...|        :...|::|        |.|
  Fly   330 ----NEILKPRLSKKCRFPLPAE--LIMVIGGTLISKWFNLYVDYNVNPVGKIP--------SGL 380

  Fly   293 PNFTVPSFHIETAERNYSIWEVLKELNIGIIVIPIVGILTNISIGKLTPK--GL-VDTNQELLTV 354
            |...:|..            :::.::.:..|.|.||.....:|:|....|  |. |..||||..:
  Fly   381 PEPVLPRL------------DLVPKVAVDSIAIAIVTYSIIMSMGLTFAKKHGYEVRPNQELFAM 433

  Fly   355 GLCNMFGSCVQAMPSSGAFTRYAISTACGLRTPMANLYLGIIVLLALSYLSPYFNYIPEATLAAI 419
            |:.||.|.|...:|.:.:.:|..|....|..:.:|:|....:|::.|.::.|:|:.:|...||.:
  Fly   434 GIGNMVGGCFSCIPMACSLSRSVIQDQTGGVSQIASLVSASLVVVTLMWIGPFFSSLPRCVLAGV 498

  Fly   420 LICSIFTL-LDFKLPMRLWRDSKRDFATWLLCFCVSVLFGVEVGLFVSIVVTALHLLFLWAR--- 480
            :|.::..: :..|...:..:..|.:..||:..|...|:..:::||.:.|.::.|.|.....:   
  Fly   499 IIVALKPMFMQAKELKKFSKQGKLEMFTWISTFLCVVIIDIDIGLLIGICISLLALYIKGLKPYS 563

  Fly   481 -------------------------PEIRV--------------------KIEQLDEMQYIRVTP 500
                                     ||:|:                    :...||::...:|:.
  Fly   564 CLLGYMPEAPGIYMDLNQHRNAMQVPEVRIFRYSGSLNFATSLFFRRALYEAVGLDKIPLTKVSS 628

  Fly   501 SN---------GIYFP-------AINYLRERVLKACEQADFRITVVIDGQRISGMDYTAAQGISK 549
            ||         ..|.|       |||...|....|     |:: :|:|...:..:|....:.::.
  Fly   629 SNSNSPSKGSKSSYSPVSQNGGKAINGKLEETSGA-----FKV-LVLDFSMLGHIDVAGCRTLTD 687

  Fly   550 LSSDL 554
            ||.:|
  Fly   688 LSKEL 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5404NP_650482.1 sulP 50..557 CDD:273284 141/654 (22%)
STAS_SulP_like_sulfate_transporter 498..>554 CDD:132913 16/71 (23%)
PrestinNP_649024.1 sulP 82..731 CDD:273284 141/654 (22%)
STAS_SulP_like_sulfate_transporter 582..730 CDD:132913 22/117 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439035
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0659
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000041
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11814
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X49
65.840

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