DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5404 and CG6928

DIOPT Version :10

Sequence 1:NP_650482.1 Gene:CG5404 / 41901 FlyBaseID:FBgn0038354 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_648539.1 Gene:CG6928 / 39367 FlyBaseID:FBgn0036240 Length:612 Species:Drosophila melanogaster


Alignment Length:594 Identity:186/594 - (31%)
Similarity:336/594 - (56%) Gaps:50/594 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 MNKWKRRLHRHVPVFQWLPLYSTEWGIDDFIAGITLGLTIIPESMACALLAGLPARYGLCSAFIG 102
            :.||..||   :|..:||..|:.:..:.|.|||:|:|||::|:.:|.|.||||..:|||.|||:|
  Fly     3 LRKWGYRL---LPGLKWLHGYTGQDAVADLIAGVTVGLTVLPQGLAYATLAGLEPQYGLYSAFVG 64

  Fly   103 PLIYMVFGSIDKVIIGPTSLVALVSVQ---FTVGRPIEFAFLLTFLSGIVQIIMGTMRMGFIFEF 164
            .:||.:.||..:|.||||:|:||::.:   |.:|....:|.||..:||:|::.|..:::|.:.:.
  Fly    65 GIIYAMLGSCRQVTIGPTALLALMTSRHTGFGLGSGPAYAILLCLISGVVELGMAVLKLGALVDL 129

  Fly   165 ISMPVIKAFSSATAILVIESQLKVLLGIKYLVAG----LMNSVGMLSSRIEESNMADLIMGVCAI 225
            ||:||...|:||||:::..||||.|||::   .|    .:|::..:...:.:....|..:|:.:|
  Fly   130 ISLPVTVGFTSATAVIIGTSQLKGLLGLR---GGSGSDFINTMRSVFGNLHKVRTGDFTLGLTSI 191

  Fly   226 VFLLLLE-----LLDRVANNEKRNKILRIFCRYLSTSRNTLIVLIAAIVSFIWIQKCGQVPYALS 285
            :.||||.     .||....|.:..:::......:.|.||.|:||:.:::::...::....|:.|:
  Fly   192 IVLLLLRKLKDVKLDGRIRNLRTQQLVSGSIWVIGTGRNALVVLVTSVLAYSTCEQMESCPFILT 256

  Fly   286 KNALSTLPNFTVPSFHIETAERN-----YSIWEVLKELNIGIIVIPIVGILTNISIGKLTPKGLV 345
            ....|.|||.::|.|.....:||     .:..::|.||...::::||:.:|.|::|.|......:
  Fly   257 GKVKSGLPNVSLPKFETTILDRNGTEIRQNFEQMLSELGPSMLILPIIAVLGNVAISKAFGGAGL 321

  Fly   346 DTNQELLTVGLCNMFGSCVQAMPSSGAFTRYAISTACGLRTPMANLYLGIIVLLALSYLSPYFNY 410
            ...:||:.:.:.|:.|:...:||.:|:|:|.|::.|.|:|||:...|..::|||||..|:|||.|
  Fly   322 SPTRELVALSMSNICGAFCSSMPVTGSFSRSAVNHASGVRTPLGGCYTSVLVLLALGLLAPYFQY 386

  Fly   411 IPEATLAAILICSIFTLLDFKLPMRLWRDSKRDFATWLLCFCVSVLFGVEVGLFVSIVVTALHLL 475
            ||:|.|:|::|.::..:::|::...|||.|:|:.....:.|.:|:..|||:||.:.:......|:
  Fly   387 IPKAALSAVIISAVIFMIEFEVIKPLWRCSRRELLPGAITFVMSLAVGVEIGLLLGVSTDVAFLV 451

  Fly   476 FLWARPEIRV-KIEQLDEMQYIRVTPS-NGIYFPAINYLRERVLKACEQADFRIT------VVID 532
            :..|||.:.| |::..:.:.||.:.|. :.:||||:.::|..:.||       :|      ||:|
  Fly   452 YRAARPVLSVSKLQTTNGINYILIRPKHSSLYFPAVEWVRSGISKA-------LTIHGTAPVVLD 509

  Fly   533 GQRISGMDYTAAQGISKLSSDLCRQADASSSTLLILFRFPEHLQRLIDNTDNLVF----CESENK 593
            ...:...|:|||:|:..|..:|     |.::..|.|....:.:..::..:.|:.|    |..:  
  Fly   510 CAHVHEFDFTAARGMGSLQKEL-----AKANAPLFLMSADKTIGVILKESTNIDFPTIDCPDD-- 567

  Fly   594 VKEFLTQES 602
             .|||.:::
  Fly   568 -LEFLLEQT 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5404NP_650482.1 PRK11660 50..557 CDD:481320 173/531 (33%)
CG6928NP_648539.1 SUL1 19..540 CDD:440424 172/535 (32%)

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