DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5399 and CG31446

DIOPT Version :10

Sequence 1:NP_650481.1 Gene:CG5399 / 41900 FlyBaseID:FBgn0038353 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001262610.1 Gene:CG31446 / 318741 FlyBaseID:FBgn0051446 Length:237 Species:Drosophila melanogaster


Alignment Length:230 Identity:72/230 - (31%)
Similarity:107/230 - (46%) Gaps:28/230 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AIICLAIVAAVASISQVSAQAQTTPQSCAQATGISFNQTAFSGQWVELARNPASNVSCISLNVAF 69
            |:..|.|:..:...:.:.||:......|.....|:.:...|||.|.|:||.|:....|..:|:..
  Fly     8 ALGLLCILVFLQGSTPILAQSNDYVALCNLTDSIAVDLDLFSGIWWEVARQPSGIDFCTEVNITV 72

  Fly    70 WN-NNNYMLVNVSHSSNVASTLVDVYETANITL-VENNLS---GYNVTLVNGQ-KQEYVFVKLL- 127
            .| ..:.:|::.:::  |:.....|.:|.|.|: ||||.:   |||.|..|.. ...|...|:| 
  Fly    73 LNKTEDNVLIDTTYA--VSPDYPWVNQTMNATITVENNTAAADGYNFTYWNPPGYTTYTVYKVLY 135

  Fly   128 -SFVNSTYLVGCTYTNATNTSTSAGFILGRSTYTPEGVRIANN----DASVSFSNFQNNTYGNVT 187
             .:.:..:|  |.|||.|:..||.|.||.|.. ||. .:|.|.    .:|:| |||.|.|...:|
  Fly   136 TDYTDVAFL--CGYTNKTDNGTSFGIILARDR-TPT-TQILNKLEGLGSSIS-SNFLNGTMSAIT 195

  Fly   188 Q------LDCRASSAGQTVPLTLISGFL-AFALLL 215
            |      ..|.|.|...  |.|:||..| |.|::|
  Fly   196 QGESFVFYSCYAPSGSN--PSTIISTMLIAMAIIL 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5399NP_650481.1 lipocalin_FABP 44..156 CDD:381182 40/119 (34%)
CG31446NP_001262610.1 lipocalin_FABP 48..163 CDD:381182 40/118 (34%)

Return to query results.
Submit another query.