DRSC/TRiP Functional Genomics Resources

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Protein Alignment AOX3 and xdhD

DIOPT Version :10

Sequence 1:NP_650477.1 Gene:AOX3 / 41896 FlyBaseID:FBgn0038349 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_417357.1 Gene:xdhD / 949079 ECOCYCID:G7500 Length:956 Species:Escherichia coli


Alignment Length:979 Identity:227/979 - (23%)
Similarity:368/979 - (37%) Gaps:221/979 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 VNAAFLLELEADN-KVKSARICFGGIRPDFIHASAIEKLLVGQNPYESSLVEQTFTKLEDLIKPD 463
            |||:.|:..:.:. .:::|. ..|......:...|:..:.|.|:.|.........|.|.|.|...
E. coli    56 VNASLLIAAQLEKADIRTAE-SLGKWNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAAP 119

  Fly   464 --EVLPDA-SPAYRSKLACGLFYKFL-----LKHAPVA--EVGEKFRSGGQILQRPLSSGLQVFQ 518
              |.:.|| |..:........:|:.:     .|:.|.|  ::...||...:::            
E. coli   120 TREEIDDALSGLFSRDAGWQQYYQVIELAVARKNNPQATIDIAPTFRDDLEVI------------ 172

  Fly   519 TQKKNYPVTQAVEKVEGMIQCSGEATYMNDVLTTSNTLHCAFVGATKVGSTIDSIDASEALKQPG 583
              .|:||.|.|.:.|:      .:..|:.| ..|::......:.:....:.|..:|.|:|...||
E. coli   173 --GKHYPKTDAAKMVQ------AKPCYVED-RVTADACVIKMLRSPHAHALITHLDVSKAEALPG 228

  Fly   584 ---VIAFYSAKDI---PGTNTFCEPS------FGFEVEEIFCSGLVRHSEQPAGVIVALTADQAH 636
               ||...:..||   ||..:..|||      ||.:         :||.......:||.:.:.|.
E. coli   229 VVHVITHLNCPDIYYTPGGQSAPEPSPLDRRMFGKK---------MRHVGDRVAAVVAESEEIAL 284

  Fly   637 RAAKLVRISYSNPSSDFKLQP--SLGDVFASPTP-------------------DSSRIVPASKST 680
            .|.||:.:.|.      .|:|  |:.:..|...|                   |:|......:..
E. coli   285 EALKLIDVEYE------VLKPVMSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHM 343

  Fly   681 SKKIKFSEQPDKEVR-------GIFQMGL---------QYHFTMEPQ--TTVAIPFE----DGLK 723
            ........:|.|.:.       |....|.         .|:.|...|  |...|.|.    |.|.
E. coli   344 IINFPIGSRPRKNIAASIHGHIGDMDKGFADADVIIERTYNSTQAQQCPTETHICFTRMDGDRLV 408

  Fly   724 IFSATQ--WMDQTQSVIAHMLQVKAKDVQLQVRRLGGGYGSKITRGNQVACA-ASLVAYKLNRPV 785
            |.::||  |..:.|  :|.::.:|...|.:...|:|||:|||.....:..|| |:.|.   .|||
E. coli   409 IHASTQVPWHLRRQ--VARLVGMKQHKVHVIKERVGGGFGSKQDILLEEVCAWATCVT---GRPV 468

  Fly   786 RFVQSLESMMDCNGKRWACRSDYKCHIKDNGKIVGLTNDFYEDAGWSPNESPIEGHSTFTAVNCY 850
            .|..:.|.....|..|...:...|...|.:|::..:..||..:.|      |...||  ..|.| 
E. coli   469 LFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTG------PYGNHS--LTVPC- 524

  Fly   851 DLNG----------DNFKNNGNAVLTD-APSSTWCRAPGSVEGIAMIENIIEHVAFEVQKDPAEV 904
              ||          ||.........:: .|:..: :..|:.:|...|...:..:|.::|.|..|:
E. coli   525 --NGPALSLPLYPCDNVDFQVTTYYSNICPNGAY-QGYGAPKGNFAITMALAELAEQLQIDQLEI 586

  Fly   905 RLAN------------------------IAAGNKISELLPQFLESREYAQRKKEIESHNAKNRW- 944
            ...|                        .||...:.|:|.|..|..:::..|.:      ...| 
E. coli   587 IERNRVHEGQELKILGAIGEGKAPTSVPSAASCALEEILRQGREMIQWSSPKPQ------NGDWH 645

  Fly   945 TKRGLGLAVMDYPIFYFGQYPATVAIYHVDGTVVVTHGGIEMGQGMNTKVAQVAAYTLGIDLSFI 1009
            ..||:.:.:....|....|....:.: ..|||.:|..||.::|.|::|.|.::||..|......:
E. coli   646 IGRGVAIIMQKSGIPDIDQANCMIKL-ESDGTFIVHSGGADIGTGLDTVVTKLAAEVLHCPPQDV 709

  Fly  1010 KVESSDTINGANSMVTGGAVGSESLCY---AVRKACETLNSRL---------EPV---------- 1052
            .|.|.||   .:::...||..|...|:   |.|.|.|.|..::         |||          
E. coli   710 HVISGDT---DHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEPVADVQLATPGV 771

  Fly  1053 ---KKKDASWIETVE-----AAYGKSINLIASDHYKKGDMQNYHIYGLALTEVELDVLTGNSQIK 1109
               ||.:.|:.:...     ..:|   :|:.:..|...|..  ..||....||.::..||..::.
E. coli   772 VRGKKGEVSFGDIAHKGETGTGFG---SLVGTGSYITPDFA--FPYGANFAEVAVNTRTGEIRLD 831

  Fly  1110 RVDILEDAGESLSPWIDIGQIEGAFVMCLGYWMSEQLVYDRETGRLLTNRTWNYKPPGAKDIPID 1174
            :...|.|.|..::|.:.:|||.||.:..:|:.|||:::||.| |..||....:|..|...|||.|
E. coli   832 KFYALLDCGTPVNPELALGQIYGATLRAIGHSMSEEIIYDAE-GHPLTRDLRSYGAPKIGDIPRD 895

  Fly  1175 FRIELIQKPNPSGAGFMRSKATGEPPCCLAVSVVFALRQALDSARHDA-GL-PREWVRLGAPTTP 1237
            ||..|:  |:....|...:|:..|    :.|:   ....|:.:|.||| |: .|||     ..||
E. coli   896 FRAVLV--PSDDKVGPFGAKSISE----IGVN---GAAPAIATAIHDACGIWLREW-----HFTP 946

  Fly  1238 ETLV 1241
            |.::
E. coli   947 EKIL 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AOX3NP_650477.1 PLN02906 24..1238 CDD:215491 225/974 (23%)
xdhDNP_417357.1 Se_sel_red_Mo 5..955 CDD:132356 227/979 (23%)

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