DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AOX3 and xdhA

DIOPT Version :10

Sequence 1:NP_650477.1 Gene:AOX3 / 41896 FlyBaseID:FBgn0038349 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_417342.1 Gene:xdhA / 947116 ECOCYCID:G7485 Length:752 Species:Escherichia coli


Alignment Length:794 Identity:185/794 - (23%)
Similarity:329/794 - (41%) Gaps:138/794 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   532 KVEGMIQCSGEATYMNDVLTTSNTLHCAFVGATKVGSTIDSIDASEALKQPGVIAFYSAKDIPGT 596
            :|:.:.:.:|.|.|.:|.: .:...:..:|.:........||:..:|...|||:|.::.:|:|..
E. coli     2 RVDAIAKVTGRARYTDDYV-MAGMCYAKYVRSPIAHGYAVSINDEQARSLPGVLAIFTWEDVPDI 65

  Fly   597 NTFCEPSFGFEVEE--------IFCSGLVRHSEQPAGVIVALTADQAHRAAKLVRISYSNPSSDF 653
             .|......:.::|        ...:..|||......::||.....|.:||:||.|.:.......
E. coli    66 -PFATAGHAWTLDENKRDTADRALLTRHVRHHGDAVAIVVARDELTAEKAAQLVSIEWQELPVIT 129

  Fly   654 KLQPSLGDVFASPTPDSSRIVPAS-KSTSKKIKFSEQPDKEVRGIFQMGLQYHFTMEPQTTVAIP 717
            ..:.:|.: .|:|..:...::..| .||....:..:..|.:|:|.:|..:..|..||..|::|..
E. coli   130 TPEAALAE-DAAPIHNGGNLLKQSTMSTGNVQQTIDAADYQVQGHYQTPVIQHCHMESVTSLAWM 193

  Fly   718 FEDG-LKIFSATQWMDQTQSVIAHMLQVKAKDVQLQVRRLGGGYGSKITRGNQVACAASLVAYKL 781
            .:|. :.|.|:||.....:.|:...|.:....|::....:|||:|:|     |......:.|:..
E. coli   194 EDDSRITIVSSTQIPHIVRRVVGQALDIPWSCVRVIKPFVGGGFGNK-----QDVLEEPMAAFLT 253

  Fly   782 NR----PVRFVQSLESMMDCNGKRWACRSDYKCHIKDNGKIVGLTNDFYEDAGWSPNESPIEGHS 842
            ::    ||:...|.|........|.|...|.:..:..:|.:.|.:.|...:.|...:    .|||
E. coli   254 SKLGGIPVKVSLSREECFLATRTRHAFTIDGQMGVNRDGTLKGYSLDVLSNTGAYAS----HGHS 314

  Fly   843 TFTAVNCYDLNGDN----------FKNNGNAVLTDAPSSTWCRAPGSVEGIAMIENIIEHVAFEV 897
            ..:|       |.|          :..:.....|:.||:...|..|:.:.:..:|::::..|..:
E. coli   315 IASA-------GGNKVAYLYPRCAYAYSSKTCYTNLPSAGAMRGYGAPQVVFAVESMLDDAATAL 372

  Fly   898 QKDPAEVRLANIA--------AGNKI-SELLPQFLESR----EYAQRKKEIESHNAKNRWTKRGL 949
            ..||.|:||.|.|        .|.:| |..||:.||..    |:.:|:.|.::.....|   ||:
E. coli   373 GIDPVEIRLRNAAREGDANPLTGKRIYSAGLPECLEKGRKIFEWEKRRAECQNQQGNLR---RGV 434

  Fly   950 GLAVMDYPIFYFGQYPATVAI------YHVDGTVVVTHGGIEMGQGMNTKVAQVAAYTLGIDLSF 1008
            |:|...|.   ...:|..|.|      .:.|||:.|..|..|:|||.:|..:|:.|.|:|:.:|.
E. coli   435 GVACFSYT---SNTWPVGVEIAGARLLMNQDGTINVQSGATEIGQGADTVFSQMVAETVGVPVSD 496

  Fly  1009 IKVESSDTIN------GA----NSMVTGGAVGSESLCY--------AVRKACETLNSRL------ 1049
            ::|.|:...:      ||    .|.|...|:.|.:|..        ||......:|..|      
E. coli   497 VRVISTQDTDVTPFDPGAFASRQSYVAAPALRSAALLLKEKIIAHAAVMLHQSAMNLTLIKGHIV 561

  Fly  1050 ------EPVKK-KDASWIETVEAAYGKSINLIASDHYKKGDM----------QNYHIYGLALTEV 1097
                  ||:.. ||.:    ::|.|          |.::|..          .|...:|....::
E. coli   562 LVERPEEPLMSLKDLA----MDAFY----------HPERGGQLSAESSIKTTTNPPAFGCTFVDL 612

  Fly  1098 ELDVLTGNSQIKRVDILEDAGESLSPWIDIGQIEGAFVMCLGYWMSEQLVYDRETGRLLTNRTWN 1162
            .:|:......|.|:..:.|:|..|:|.:..||:.|...|.:|:.:.|:::.|.::|.:......:
E. coli   613 TVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDAKSGVVRNPNLLD 677

  Fly  1163 YKPPGAKDIP-IDFRIELIQKPNPSGAGFMRSKATGEPPCCLAVSVVFALRQALDSARHDAGLPR 1226
            ||.|...|:| ::.....|.:|. |..|   .|:.||||   .:.|..|:|.|:..|   .|:..
E. coli   678 YKMPTMPDLPQLESAFVEINEPQ-SAYG---HKSLGEPP---IIPVAAAIRNAVKMA---TGVAI 732

  Fly  1227 EWVRLGAPTTPETL 1240
            ..:    |.||:.|
E. coli   733 NTL----PLTPKRL 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AOX3NP_650477.1 PLN02906 24..1238 CDD:215491 183/790 (23%)
xdhANP_417342.1 PRK09970 1..752 CDD:236637 185/794 (23%)

Return to query results.
Submit another query.