DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AOX3 and aox5

DIOPT Version :9

Sequence 1:NP_001303439.1 Gene:AOX3 / 41896 FlyBaseID:FBgn0038349 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_001265725.1 Gene:aox5 / 64265 ZFINID:ZDB-GENE-001205-2 Length:1336 Species:Danio rerio


Alignment Length:1358 Identity:397/1358 - (29%)
Similarity:619/1358 - (45%) Gaps:182/1358 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FSINGLPYAVNLTNLPPDITLNTFIREHAQLTATKFMCQEGGCGACICVV------RDGKRSWAV 63
            |.|||......  |..|:..|..::|....||..|:.|..||||||..:|      :|....|:|
Zfish    12 FYINGKKIVEK--NADPEEMLLAYLRRKVGLTGAKYGCGGGGCGACTVMVSRYDPLQDTVLHWSV 74

  Fly    64 NSCLTLLNTCAQLEIVTAEGLGNQRTGYNPIQKRLAKMNGTQCGFCSPGFVMNMYGLMEQNEGKV 128
            |:||..:.:.....:||.||:|:.:|..:|:|:|:.|.:|:|||||:||.||:||.|: :|....
Zfish    75 NACLQPICSLHGAAVVTVEGIGSTKTKLHPVQERIVKAHGSQCGFCTPGMVMSMYTLL-RNNPHP 138

  Fly   129 TMAEVENSFGGNICRCTGYRPILDAMKSFAVDSNIAIPAECGDIEDLKPRNCPKTGQAC------ 187
            |:.::..:.|||:|||||||||:|..|:|.     ..|..|        :|....|:.|      
Zfish   139 TIEDIRETLGGNLCRCTGYRPIIDGFKTFC-----ETPVCC--------QNGGGNGKCCMENGNS 190

  Fly   188 ------SG------SCLP----STLVYE------------------DGVQWHWPKSLSELFDALD 218
                  ||      :.||    ..|::.                  :.|:|..|..|.:|.    
Zfish   191 HNESDISGELFIMDNVLPLDPTQDLIFPPELLIMGKKKAERHCFQGEKVRWISPSDLKDLI---- 251

  Fly   219 KVK-DSEEFMLVAGNTAHGVYRRSTDIKHFIDVQG--VEELHQHSSEGQQLKLGANLSLTQTMEI 280
            |:| :..:..|:.|||..|.........|.:.:.|  :.||.........:.:||..||:...::
Zfish   252 KLKAEHSDAPLLVGNTTIGPKMNLNKTVHPLVIYGGSIAELQAIKWRKNCITVGAGCSLSVLKDV 316

  Fly   281 IRTTSKQPGFE---YLDVLWNHIDLIANVPVRNSGTLAGNISIKKQNPEFP-SDIFISFEALNVK 341
            ::...:..|.|   ....|...:..:|...:||..|:.||  |...||::. |.|..:.|.    
Zfish   317 LQQRIEDLGPEKSRVYQALVQTLQCLAGKQIRNMATIGGN--ILSANPKYDLSSILAAAEC---- 375

  Fly   342 VVALKNAADEKEMSLAEYLGTNDKKLVLK------TFVLPAYPKDKYIYESYKIMPRAQNAHAYV 400
            .:.:.:...::|:.|:|...|:..|..|:      ...:| :.|......:::...|.:.|.:.|
Zfish   376 TLHIASKDGDREICLSEEFFTDFGKTALRPEEILLAIDIP-HSKPWEFVSAFRQAQRREFAFSIV 439

  Fly   401 NAAFLLELEAD-NKVKSARICFGGIRPDFIHASAIEKLLVGQNPYESSLVEQTFTKLEDLIKPDE 464
            ||...:....| |.|:...|.:||:....:.|....|.|:|:...|..|.|.| ..||:.|....
Zfish   440 NAGMRVAFRHDSNVVEHLDIFYGGVGCTLVKARHTCKELIGRKWDEKLLAEGT-QLLEEEISVPA 503

  Fly   465 VLPDASPAYRSKLACGLFYKF---LLKHAPVAEVGEKFRSGGQILQRPLS--SGLQVF------- 517
            .:|.....||..|....|:||   :|......|||        :...||.  |.|:.|       
Zfish   504 TVPGGREEYRKALVLSFFFKFYMQVLLELQQREVG--------VNDLPLEYLSALKPFKNEVPQG 560

  Fly   518 --------QTQKKNYPVTQAVEKVEGMIQCSGEATYMNDVLTTSNTLHCAFVGATKVGSTIDSID 574
                    :||..:.||.:....:..:.|.:|||.|.:|:.:....|..:.|.:|:..:.|.|||
Zfish   561 NYSYQLVPETQSSSDPVGRPNVHLAALQQATGEAVYYDDIPSVKGELFVSMVTSTRAHAKIISID 625

  Fly   575 ASEALKQPGVIAFYSAKDIPGTNT---FCEPSFGFEVEEIFCSGLVRHSEQPAGVIVALTADQAH 636
            ||.||..|||:.|.||||:||.|.   |..|...|..||:.|.|      |..|.|||.|.:||.
Zfish   626 ASVALAMPGVVDFISAKDVPGQNRRLWFNNPEELFAEEEVICVG------QIIGAIVAETREQAK 684

  Fly   637 RAAKLVRISYSNPSSDFKLQPSLGDVF---ASPTPDSSRIVPASKSTSKKIK--FSEQPDKEVRG 696
            |||:.|.|:|.:      :||    ||   .......|...|..|.....::  |: :.|:.:.|
Zfish   685 RAAQQVDITYQD------MQP----VFFTIEEAIEHESFFDPKRKLERGNVEEGFA-KADQILEG 738

  Fly   697 IFQMGLQYHFTMEPQTTVAIPFEDG--LKIFSATQWMDQTQSVIAHMLQVKAKDVQLQVRRLGGG 759
            ...||.|.||.||.|..:|||..:.  ::::.|:|....||.|:...|.:.:..:...|:|||||
Zfish   739 EMYMGGQEHFYMETQGVIAIPTGEASEIELYVASQHAAYTQEVVGITLGIDSNKITCHVKRLGGG 803

  Fly   760 YGSKITRGNQVACAASLVAYKLNRPVRFVQSLESMMDCNGKRWACRSDYKCHIKDNGKIVGLTND 824
            :|.|:.:...::..|:..|.|....||.|......|.....|......||....::|.|:.....
Zfish   804 FGGKVMKIASLSAIAATAAIKTGHAVRCVLERGDDMLITSGRSPFLGRYKIGYMNDGTILAADIT 868

  Fly   825 FYEDAGWSPNESP-IEGHSTFTAVNCYDLNGDNFKNNGNAVLTDAPSSTWCRAPGSVEGIAMIEN 888
            :|.:.|.:.:||. |...:.....|.|.:  .|.:..|....|..||.|..|..|..:|:.:||:
Zfish   869 YYSNGGCTLDESSFIMEKALLHMDNGYKI--PNLRGRGLVCKTFLPSYTAFRGFGGPQGLTIIES 931

  Fly   889 IIEHVAFEVQKDPAEVRLANIAAGNKI----SELLP---------QFLESREYAQRKKEIESHNA 940
            ::..||.:......:||..|:....|.    .:|..         :.||...|.||.:.||..|.
Zfish   932 VLHEVAVKCGLPAHQVRDINLYKEEKCFTHHKQLFSPHDMVRCWNECLEKSNYTQRCQYIEQFNG 996

  Fly   941 KNRWTKRGLGLAVMDYPI----FYFGQYPATVAIYHVDGTVVVTHGGIEMGQGMNTKVAQVAAYT 1001
            .|.|.|||:.:..:.:.|    .::.|..|.|.:|. ||:||::|||.|||||:|||..|:|:..
Zfish   997 HNHWKKRGISIVPIKFGIGFSKGFYNQGAALVNVYK-DGSVVISHGGTEMGQGINTKAIQIASRI 1060

  Fly  1002 LGIDLSFIKVESSDTINGANSMVTGGAVGSESLCYAVRKACETLNSRLEPVKKK--DASWIETVE 1064
            |.:.:|.|.::.:.|.|..|:..:..:.|::::..||:..||.|..||||:.||  ..:|.:.|.
Zfish  1061 LKVSMSSIHIKETCTGNVPNAAPSAASFGTDAVGMAVKNGCEKLMRRLEPLIKKHPQYTWQQLVV 1125

  Fly  1065 AAYGKSINLIASDHY-----------KKGDMQNYHIYGLALTEVELDVLTGNSQIKRVDILEDAG 1118
            .||.:.|:|.|:..:           .:|:...|..:|...:|||:|.|||:.:..|.||:.|.|
Zfish  1126 EAYCQKISLSATGFFMGPHTSVDWEKSEGNAYYYFTFGACCSEVEIDCLTGDHKNIRTDIVMDVG 1190

  Fly  1119 ESLSPWIDIGQIEGAFVMCLGYWMSEQLVYDRETGRLLTNRTWNYKPPGAKDIPIDFRIELIQK- 1182
            .|::|.:|:||:||.||..:|.:..|:|.:..: |.|||.....||.|...|:|....:.|::. 
Zfish  1191 RSINPALDVGQVEGGFVQGIGLYTIEELQFSPQ-GVLLTRGPSQYKIPALCDVPPQINVHLLRNA 1254

  Fly  1183 PNPSGAGFMRSKATGEPPCCLAVSVVFALRQALDSARHDAGLPREWVRLGAPTTPETL 1240
            .||.  ....||..||||.....::.||:::|:.:||.:.|| .|.....:|.|.|.:
Zfish  1255 DNPH--AIYSSKGIGEPPVFFGCTLFFAIKEAIAAARKERGL-SESFSFSSPATAEKI 1309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AOX3NP_001303439.1 PLN02906 24..1238 CDD:215491 390/1335 (29%)
Fer2_2 80..153 CDD:280048 36/72 (50%)
FAD_binding_4 201..360 CDD:303082 38/165 (23%)
CO_deh_flav_C 386..487 CDD:281449 29/104 (28%)
Ald_Xan_dh_C 540..646 CDD:214971 47/108 (44%)
Ald_Xan_dh_C2 688..1172 CDD:280834 159/516 (31%)
aox5NP_001265725.1 mam_aldehyde_ox 8..1336 CDD:132014 397/1358 (29%)
Fer2_2 91..162 CDD:280048 36/71 (51%)
FAD_binding_5 237..417 CDD:279309 42/190 (22%)
CO_deh_flav_C 424..528 CDD:281449 29/104 (28%)
Ald_Xan_dh_C 591..696 CDD:214971 48/110 (44%)
Ald_Xan_dh_C2 718..1243 CDD:280834 161/529 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D48717at2759
OrthoFinder 1 1.000 - - FOG0000201
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100184
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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