DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AOX3 and aox1

DIOPT Version :9

Sequence 1:NP_001303439.1 Gene:AOX3 / 41896 FlyBaseID:FBgn0038349 Length:1254 Species:Drosophila melanogaster
Sequence 2:XP_012825683.2 Gene:aox1 / 100495429 -ID:- Length:1323 Species:Xenopus tropicalis


Alignment Length:1372 Identity:414/1372 - (30%)
Similarity:640/1372 - (46%) Gaps:203/1372 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TTKFSINGLPYAVNLTNLPPDITLNTFIREHAQLTATKFMCQEGGCGACICVVRD----GKR--S 60
            |..|.:||......  |..|:..|..::|:...||.||:.|..||||||..:|..    .|:  .
 Frog     9 TLIFFVNGRKIVEE--NADPEELLLPYLRKKLLLTGTKYGCGGGGCGACTVMVSTIHPVSKKILH 71

  Fly    61 WAVNSCLTLLNTCAQLEIVTAEGLGNQRTGYNPIQKRLAKMNGTQCGFCSPGFVMNMYGLMEQNE 125
            ::.|:||..:.:.....:.|.||:|:..|..:|:|:|:||.:|:|||||:||.||::|.|: :|.
 Frog    72 FSANACLLPICSMHGAAVTTIEGIGSTTTKLHPVQERIAKAHGSQCGFCTPGMVMSVYSLL-RNH 135

  Fly   126 GKVTMAEVENSFGGNICRCTGYRPILDAMKSFAVDSNIAIPAECGDIEDLKPRNCPK--TGQACS 188
            .:.||.::..|.|||:|||||||||:|..::|...::.....|.|..:...|.....  ||....
 Frog   136 PEPTMEQIYESLGGNLCRCTGYRPIVDGCRTFCNKTDCCQVKENGMEKISTPDTVDNILTGLFKE 200

  Fly   189 GSCLP---------------------STLVYEDG-VQWHWPKSLSELFDALDKVKDSEEFMLVAG 231
            ...||                     ..|:::.| :.|..|.||.||   |.......:..||.|
 Frog   201 EQFLPLDPTQELIFPPELLLMDKEKKEKLIFQGGRMTWISPSSLQEL---LQLKATYPKAPLVVG 262

  Fly   232 NTAHGVYRRSTDIKH--FIDVQGVEELH--QHSSEGQQLKLGANLSLTQTMEIIR-TTSKQP--G 289
            ||..|...:...|.|  .|....:.||:  .|..:|  :.:||..|||...|.:: ..::||  .
 Frog   263 NTIVGPEMKFRGIFHPVIISPSRIPELNFVIHKDDG--ITVGAACSLTVLKEALKEVVTQQPEEK 325

  Fly   290 FEYLDVLWNHIDLIANVPVRNSGTLAGNISIKKQNPEFPSDIFISFEALN--VKVVALKNAADEK 352
            .:....|...::.:....:||:.:|.|||..:...    ||:.....|.|  :.|.|:...   :
 Frog   326 TKLFHALLQQLETLGGPQIRNTASLGGNIISRSPT----SDLNPVLAAGNCILTVAAIDGT---R 383

  Fly   353 EMSLAEYLGTNDKKL--VLKTFVLPAYPKDKYIYESYKIMPRAQNAHAYVNAAFLLELEADNK-V 414
            :|.|.|....:..|.  ||.:..|| |.|....|..::...|.:||...|.|...::.|.:.. :
 Frog   384 QMPLDEAFFAHSLKAEEVLVSVHLP-YSKKGDHYSVFRQAQRRENALPIVTAGMKVQFEENTDII 447

  Fly   415 KSARICFGGIRPDFIHASAIEKLLVGQNPYESSLVEQTFTKLEDL-IKPDEVLPDASPAYRSKLA 478
            |..||.:||:.|..:.|....:.|:|::..:..|.|.....:.:: :.|.  .|.....|||.|.
 Frog   448 KVIRIFYGGVGPTTVFAKTTCQDLIGKHWDDHMLSEACRLMVHEITLSPS--APGGMVEYRSTLT 510

  Fly   479 CGLFYKFLLKHAPVAEVGEKFRSGGQILQRPLS---------SGLQVFQT--------------- 519
            ...|:||.|                ::||| |:         |.|..|:|               
 Frog   511 ISFFFKFYL----------------EVLQR-LNHMGTHYSDVSALNSFETLCNENVQLYQDVSSR 558

  Fly   520 QKKNYPVTQAVEKVEGMIQCSGEATYMNDVLTTSNTLHCAFVGATKVGSTIDSIDASEALKQPGV 584
            |....|:.:.:....|:...:|||.|.:|:......|...||.:||..:.|.|:|.||||.||||
 Frog   559 QSVQDPIGRPIMHYSGIKHATGEAVYCDDMPCVDGELFLYFVTSTKAHAKIVSLDFSEALAQPGV 623

  Fly   585 IAFYSAKDIPGTNTFCEPSFG------FEVEEIFCSGLVRHSEQPAGVIVALTAD---QAHRAAK 640
            :...:.:|.|||   |:..|.      ...:::.|.|         .:|.|:.||   :|.:||.
 Frog   624 VDVVTTEDCPGT---CKSMFEEGEVPLLAKDKVLCVG---------QIICAVLADTPARAKKAAA 676

  Fly   641 LVRISYSN-------------PSSDFKLQPSLGDVFASPTPDSSRIVPASKSTSKKIKFSEQPDK 692
            .|::.|.|             .:|.||.|..|         ::..:..|.||.          |:
 Frog   677 AVKVVYENLEPVILTIQEAIEHNSFFKPQRKL---------ENGNVEEAFKSA----------DQ 722

  Fly   693 EVRGIFQMGLQYHFTMEPQTTVAIP-FED-GLKIFSATQWMDQTQSVIAHMLQVKAKDVQLQVRR 755
            ...|...:|.|.||.||.|:...:| .|| .:.::.:||.....|::||.:|.|.:..:...|:|
 Frog   723 IQEGEIYIGGQEHFYMETQSIRVLPKGEDKEMDVYVSTQDPTYIQNLIATILNVPSNRITCHVKR 787

  Fly   756 LGGGYGSKITRGNQVACAASLVAYKLNRPVRFVQSLESMMDCNGKRWACRSDYKCHIKDNGKIVG 820
            :||.:|.|.|:...:|...::.|.|..|.||.|......|...|.|......||....::|.|..
 Frog   788 VGGAFGGKTTKTGNIAAITAVAANKTRRAVRCVFERGDDMLITGGRHPFLGKYKVGFMNDGHITA 852

  Fly   821 LTNDFYEDAGWSPNESPIEGHSTFTAVNCYDLNGD------NFKNNGNAVLTDAPSSTWCRAPGS 879
            :...::.:||.:|::|.:       .|....:|.|      |.:..|.|..|:.||:|..|..|.
 Frog   853 VDVAYFSNAGCTPDDSVL-------VVEIALMNMDSAYRLPNVRCTGTACKTNLPSNTAFRGFGY 910

  Fly   880 VEGIAMIENIIEHVAFEVQKDPAEVRLAN----IAAGNKISELLPQFL--------ESREYAQRK 932
            .:...:.|..|..||.:.:..|.:||..|    |:..:...|:|.:.|        |...|..|:
 Frog   911 PQAAFVTETWISEVAIKCRIPPEKVREMNLYKDISQTHFRQEILARTLGMCWNECMEKSSYNSRR 975

  Fly   933 KEIESHNAKNRWTKRGLGLAVMDYPI----FYFGQYPATVAIYHVDGTVVVTHGGIEMGQGMNTK 993
            ..||:.|..|.|.|:||.:..|.:||    .:|||..|.|.|| :||:|:|||||||||||::||
 Frog   976 LAIENFNKDNYWKKKGLAIIPMKFPIGSLAKFFGQAAALVHIY-LDGSVLVTHGGIEMGQGVHTK 1039

  Fly   994 VAQVAAYTLGIDLSFIKVESSDTINGANSMVTGGAVGSESLCYAVRKACETLNSRLEPVKKKD-- 1056
            :.|:|:..|||.||:|.:..::|.:..|:.|:||::|::....||:.|||.|..||.|::.|:  
 Frog  1040 IMQIASRELGIPLSYIHICETNTSSVPNTQVSGGSLGTDVNGMAVKNACEILMQRLLPIRSKNPK 1104

  Fly  1057 ASWIETVEAAYGKSINLIASDHYK-----------KGDMQNYHIYGLALTEVELDVLTGNSQIKR 1110
            :||.|.|..||.:|::|.|:...:           :|:..:|.:||:|.:|||:|.|||:.:..|
 Frog  1105 SSWKEWVTEAYMQSVSLSATGFCRSFDRELNWETGEGNPVHYCVYGVACSEVEIDCLTGDHKNLR 1169

  Fly  1111 VDILEDAGESLSPWIDIGQIEGAFVMCLGYWMSEQLVYDRETGRLLTNRTWNYKPPGAKDIPIDF 1175
            .||:.|.|.|::|.:||||||||||..||.:..|:|.:. ..|.|.|.....||.|..:|||..|
 Frog  1170 TDIVIDFGCSINPAVDIGQIEGAFVQGLGLFTIEELKFS-PNGVLYTRGPAQYKIPSVRDIPEQF 1233

  Fly  1176 RIELIQKPNPSGAGFMRSKATGEPPCCLAVSVVFALRQALDSARHDAGLPREWVRLGAPTTPETL 1240
            .:.|:... |:......||..|||...|..|:.||::.|:.|||.:.|: .|...|.:|.|||.:
 Frog  1234 NVSLLSNV-PNSCAIYSSKGVGEPALFLGSSIYFAIKDAVLSARRERGM-SELFTLNSPATPEKI 1296

  Fly  1241 VVNAGHE 1247
            .:..|.:
 Frog  1297 RMACGDQ 1303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AOX3NP_001303439.1 PLN02906 24..1238 CDD:215491 405/1339 (30%)
Fer2_2 80..153 CDD:280048 38/72 (53%)
FAD_binding_4 201..360 CDD:303082 45/168 (27%)
CO_deh_flav_C 386..487 CDD:281449 26/102 (25%)
Ald_Xan_dh_C 540..646 CDD:214971 37/114 (32%)
Ald_Xan_dh_C2 688..1172 CDD:280834 178/520 (34%)
aox1XP_012825683.2 mam_aldehyde_ox 10..1323 CDD:132014 413/1371 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D48717at2759
OrthoFinder 1 1.000 - - FOG0000201
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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