DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AOX3 and aox1

DIOPT Version :9

Sequence 1:NP_001303439.1 Gene:AOX3 / 41896 FlyBaseID:FBgn0038349 Length:1254 Species:Drosophila melanogaster
Sequence 2:XP_017953036.2 Gene:aox1 / 100379890 XenbaseID:XB-GENE-6045207 Length:1322 Species:Xenopus tropicalis


Alignment Length:1344 Identity:396/1344 - (29%)
Similarity:627/1344 - (46%) Gaps:171/1344 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FSINGLPYAVNLTNLPPDITLNTFIREHAQLTATKFMCQEGGCGACICVVRD----GKRSWAVNS 65
            |.:||  ..|...|..|:..|..::|.:..||.||:.|..||||||..::..    .|:.....:
 Frog    13 FYVNG--RKVVEKNPDPEDMLLPYLRRNLHLTGTKYGCGGGGCGACTVMISTVHPVSKKIIHYPA 75

  Fly    66 CLTLLNTCAQL--EIVTAEGLGNQRTGYNPIQKRLAKMNGTQCGFCSPGFVMNMYGLMEQNEGKV 128
            ...||..|:..  .:.|.||:||..|..:|:|:|:||.:|:|||||:||.||::|.|: :|..:.
 Frog    76 LACLLPICSLYGNAVTTTEGIGNSTTKLHPVQERIAKAHGSQCGFCTPGMVMSIYTLL-RNHPEP 139

  Fly   129 TMAEVENSFGGNICRCTGYRPILDAMKSFAVDSNIAIPAECGDIEDLKPRNCPKTGQACSGSCLP 193
            ||.::.::..||:|||||||||||..|:|:.|..:....| ..:|::|  :.||           
 Frog   140 TMEQILSALSGNLCRCTGYRPILDGCKTFSKDCCLNEKKE-HRLEEVK--SFPK----------- 190

  Fly   194 STLVYE---------------------------------DGVQWHWPKSLSELFDALDKVKDSEE 225
              |.||                                 :.:.|:.|.:|.|:.:...|...:. 
 Frog   191 --LFYEKDFLPLDPTQDLIFPPELMMMFNSQKKMNVFLGERITWYSPSTLDEILELKTKYPSAP- 252

  Fly   226 FMLVAGNTAHGVYRRSTDIKH--FIDVQGVEELHQHSSEGQQLKLGANLSLTQTMEII---RTTS 285
              ||.||||.|...:...:.|  .|....|.:|:..|.....:.:||..||:|..||:   .:..
 Frog   253 --LVVGNTALGPQMKFQGVIHPVLISPVRVMDLYNVSLNDMGISIGAACSLSQVKEILCENISAI 315

  Fly   286 KQPGFEYLDVLWNHIDLIANVPVRNSGTLAGNISIKKQNPEFPSDIFISFEALNVKVVALKNAAD 350
            ::...:....|..|:..:|...:|:..::.|:|..|:...:....:......||   .|.|....
 Frog   316 QEDKAKIFHALLQHLGTLAGEQIRSMASIGGHIISKRTISDLNPILAAGGAILN---FASKGETR 377

  Fly   351 EKEMSLAEYLGTNDKKL--VLKTFVLPAYPKDKYIYESYKIMPRAQNAHAYVNAAFLLELEADNK 413
            :.|::...:.|::.:|.  ||.:..:|...||::: .:::...|.:||:|.|||...:..|.|..
 Frog   378 QVELNELFFTGSSPQKSEEVLLSVFIPYSKKDEFV-SAFRQAQRDENANAIVNAGMKVHFEEDTD 441

  Fly   414 -VKSARICFGGIRPDFIHASAIEKLLVGQNPYESSLVEQTFTKLEDL-IKPDEVLPDASPAYRSK 476
             ||...|.:|.:.|..::|....:.|:|::..|..|.|.....||:: :.|.  .|.....||..
 Frog   442 IVKEMAIYYGCMGPSTVYAKNTSQALIGRHWDEEMLNEACKLILEEITLSPS--APGGKVQYRRA 504

  Fly   477 LACGLFYKFLL-------KHAPVAEVGEKFRSGGQILQRPLSSGLQVFQTQKKNYPVTQAV---- 530
            |....|:||.|       |....:.|...:.|..:..:......||:||..::..|:...|    
 Frog   505 LTISFFFKFYLQVLQCLKKTIKSSSVASDYISAIKDFEINTPKTLQIFQETEQEQPIDDPVGHPI 569

  Fly   531 EKVEGMIQCSGEATYMNDVLTTSNTLHCAFVGATKVGSTIDSIDASEALKQPGVIAFYSAKDIPG 595
            ....|:.|.:|||.|::|:.|....|..|||.:.:..:.|.||||||||..|||.....|:||||
 Frog   570 VHTSGIKQATGEAIYVDDMPTVDQELFIAFVTSKRAHAKILSIDASEALALPGVCDIIRAEDIPG 634

  Fly   596 TNTFCEPSFGFEVEEIFCSGLVRHSEQPAGVIVALTADQAHRAAKLVRISYSNPSSDFKLQPSLG 660
            .|.....:..|..:::.|.|      |....:||.|...|.:||..|:|.|.|      |:|   
 Frog   635 KNELDGLNHLFSEDKVECVG------QIICAVVADTPKHAKQAAAKVKIDYQN------LEP--- 684

  Fly   661 DVFASPTPDSSRIVPASKSTSKKIKFSEQPDKEV----------------RGIFQMGLQYHFTME 709
                        ::...:...|...|.| |:|::                .|...:|.|..|.||
 Frog   685 ------------VILTMEDAIKNNSFFE-PEKKIIHGNAEEAFKSADHILEGEVHIGGQEQFYME 736

  Fly   710 PQTTVAIP--FEDGLKIFSATQWMDQTQSVIAHMLQVKAKDVQLQVRRLGGGYGSKITRGNQVAC 772
            ..|.:.:|  .|:.|.|:.:||.....|..:|..|.|.:..|...|:|:||.:|.|||:.:..||
 Frog   737 TNTVLVVPKGEENELDIYVSTQDPTGVQLAVAACLNVPSNRVMCHVKRVGGAFGGKITKPSIFAC 801

  Fly   773 AASLVAYKLNRPVRFVQSLESMMDCNGKRWACRSDYKCHIKDNGKIVGLTNDFYEDAGWSPNESP 837
            |:::.|:|..||||.|......|.....|......||....::|:||||...||.:||.|.:||.
 Frog   802 ASAVAAHKTKRPVRCVLERGEDMLITAGRHPFFGKYKVGFMNDGRIVGLDVSFYTNAGCSTDESI 866

  Fly   838 IEGHSTFTAVNCYDLNGDNFKN---NGNAVLTDAPSSTWCRAPGSVEGIAMIENIIEHVAFEVQK 899
            :   ....|:...| |..:|.|   ...|..|:.||:|..|..|..:...:.|.|::.||.:...
 Frog   867 L---VLVVALIKMD-NAYHFPNLTCTATACKTNLPSNTAFRGFGFPQTGLVTETIMDAVAVKCGL 927

  Fly   900 DPAEVRLANIAAG------------NKISELLPQFLESREYAQRKKEIESHNAKNRWTKRGLGLA 952
            .|.:||..|:..|            ..:.....:.::...|..|:..|:..|.:|.|.|:|:.:.
 Frog   928 QPHQVREKNMYTGIGKTHYNQEFDSTNLMRCWNECMQKSSYQSRRDAIQEFNKENYWKKKGIAII 992

  Fly   953 VMDYPI-FYFGQYPATVAIYHV--DGTVVVTHGGIEMGQGMNTKVAQVAAYTLGIDLSFIKVESS 1014
            .:.:.: |....|....|:.|:  ||.|:|:|.|:|||||:.||:.||.:..|.|.:|:|.:..:
 Frog   993 PLKFTVGFVEKTYHQAAALVHIYRDGYVLVSHSGVEMGQGLYTKIVQVVSRELKIPMSYIYICET 1057

  Fly  1015 DTINGANSMVTGGAVGSESLCYAVRKACETLNSRLEPV--KKKDASWIETVEAAYGKSINLIASD 1077
            .|:...||:.:||::|::....||:.||:.|..||||:  :..:..|.|.|..|:.:.|:|.::.
 Frog  1058 STVTVPNSIASGGSIGTDITGIAVKNACDILQQRLEPIISRNPNGKWEEWVSEAFEQRISLSSTG 1122

  Fly  1078 HYK-----------KGDMQNYHIYGLALTEVELDVLTGNSQIKRVDILEDAGESLSPWIDIGQIE 1131
            :|:           :|....|:|:|.|.:|:|||.|||.....|.||:.|.|:|::|.|||||:|
 Frog  1123 YYRGYDTYMDWEKGEGHAGPYYIFGAACSEIELDCLTGKYNNLRTDIVMDLGQSINPGIDIGQVE 1187

  Fly  1132 GAFVMCLGYWMSEQLVYDRETGRLLTNRTWNYKPPGAKDIPIDFRIELIQKPNPSGAGFMRSKAT 1196
            |||....|.:.:|:|.|. ..|.|.|.....|..|...|||.:|.:.|:...| :......||..
 Frog  1188 GAFTQGFGLYTTEELQYS-PFGSLYTLGPDKYIMPAVCDIPREFNVYLLASSN-NPYTIYSSKGV 1250

  Fly  1197 GEPPCCLAVSVVFALRQALDSARHDAGLPREWVRLGAPTTPETL 1240
            ||....|..||.||::.|:||||.:.||.:::. |.:|..||.:
 Frog  1251 GETALFLGCSVFFAIKDAIDSARAERGLSKDFT-LNSPAGPERI 1293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AOX3NP_001303439.1 PLN02906 24..1238 CDD:215491 388/1321 (29%)
Fer2_2 80..153 CDD:280048 38/72 (53%)
FAD_binding_4 201..360 CDD:303082 36/163 (22%)
CO_deh_flav_C 386..487 CDD:281449 30/102 (29%)
Ald_Xan_dh_C 540..646 CDD:214971 40/105 (38%)
Ald_Xan_dh_C2 688..1172 CDD:280834 167/532 (31%)
aox1XP_017953036.2 mam_aldehyde_ox 11..1320 CDD:132014 396/1344 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D48717at2759
OrthoFinder 1 1.000 - - FOG0000201
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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