DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AOX2 and xdhD

DIOPT Version :10

Sequence 1:NP_732047.2 Gene:AOX2 / 41895 FlyBaseID:FBgn0038348 Length:1264 Species:Drosophila melanogaster
Sequence 2:NP_417357.1 Gene:xdhD / 949079 ECOCYCID:G7500 Length:956 Species:Escherichia coli


Alignment Length:1059 Identity:220/1059 - (20%)
Similarity:383/1059 - (36%) Gaps:284/1059 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 NPSTQRVMNLLTYLGDTTSKLVLGGFILKAYPKDRFLFRSYKILPRAQNVHAYVNAGFLI----- 412
            ||. :.|..||..:|..:.:....||....  .|..:|..        |:   |||..||     
E. coli    17 NPG-ENVQKLLFNMGMHSVRNSDDGFGFAG--SDAIIFNG--------NI---VNASLLIAAQLE 67

  Fly   413 -----------EWQDIQHRIVHSARICFGNIRPDY-------IHDDQVEQL-LPGRDLYDPATVA 458
                       :|.::.  :|..|.:..|.::..|       |..|.:::: .|.|:..|.| ::
E. coli    68 KADIRTAESLGKWNELS--LVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAAPTREEIDDA-LS 129

  Fly   459 QIFQELPASLQPEERPPEASPEYRQMLACSLLYKFLLATAPKER------VRERFRTGGLLLERP 517
            .:|.. .|..|          :|.|::.        ||.|.|..      :...||         
E. coli   130 GLFSR-DAGWQ----------QYYQVIE--------LAVARKNNPQATIDIAPTFR--------- 166

  Fly   518 LSSGSQSFETIKKNYPVTQPVQKLEGLIQCSGEATYMNDLLTTSNAVHCAFVTAKRVGATIEQID 582
                 ...|.|.|:||.|...:.::      .:..|:.|.: |::|.....:.:....|.|..:|
E. coli   167 -----DDLEVIGKHYPKTDAAKMVQ------AKPCYVEDRV-TADACVIKMLRSPHAHALITHLD 219

  Fly   583 PSAALQCKGVV---AFYSAEDI---PGSNNFVLVNQLTPE---VDEVFVAGRVKYFDQPLGVIAA 638
            .|.|....|||   ...:..||   ||       .|..||   :|......::::....:..:.|
E. coli   220 VSKAEALPGVVHVITHLNCPDIYYTPG-------GQSAPEPSPLDRRMFGKKMRHVGDRVAAVVA 277

  Fly   639 LTHDAAVYAATLVVVTYARDQRKIFTTMNQVLAE------KQTDRIVSTKKDTVE---------- 687
            .:.:.|:.|..|:.|.|  :..|...::::.:||      .:....|:...||:|          
E. coli   278 ESEEIALEALKLIDVEY--EVLKPVMSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRG 340

  Fly   688 -------PLKLPP------------------LAPGDVLGRGILELASQYHFTMEPQTTIVVPL-- 725
                   |:...|                  .|..||:      :...|:.|...|......:  
E. coli   341 EHMIINFPIGSRPRKNIAASIHGHIGDMDKGFADADVI------IERTYNSTQAQQCPTETHICF 399

  Fly   726 ----DNILQVYCATQ--WMDATQGAIAHMLKVSVNSIQLQVRRVGGAYGAK--VTRGNIVACATA 782
                .:.|.::.:||  |....|  :|.::.:..:.:.:...||||.:|:|  :....:.|.||.
E. coli   400 TRMDGDRLVIHASTQVPWHLRRQ--VARLVGMKQHKVHVIKERVGGGFGSKQDILLEEVCAWATC 462

  Fly   783 LVASKLRRPARFVQTIESMMETIGKRWACRSDYEFRARANGSIIMLSNNYYEDSGCNLNENVV-- 845
            :..    ||..|..|.|........|...:...:..|:.:|.:..:..::..::|...|.::.  
E. coli   463 VTG----RPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVP 523

  Fly   846 ---DFLTLPI--LRNVYNLTDANYRTQGSAIRTDAPSSTWCRAPGSAEGIAMTETALEHIAFTCQ 905
               ..|:||:  ..||    |....|..|.|   .|:..: :..|:.:|......||..:|...|
E. coli   524 CNGPALSLPLYPCDNV----DFQVTTYYSNI---CPNGAY-QGYGAPKGNFAITMALAELAEQLQ 580

  Fly   906 LDPADVRLVN----------------------------------LQPGNKMVQ-LLPKFLASTEY 935
            :|..::...|                                  |:.|.:|:| ..||       
E. coli   581 IDQLEIIERNRVHEGQELKILGAIGEGKAPTSVPSAASCALEEILRQGREMIQWSSPK------- 638

  Fly   936 HKRRDQINLFNSQN-RWR-KRGLGLALMSFPLNTTVAFNYPVTVAIYHEDGSVVISHGGIEIGQG 998
                       .|| .|. .||:.:.:....:......|..:.:   ..||:.::..||.:||.|
E. coli   639 -----------PQNGDWHIGRGVAIIMQKSGIPDIDQANCMIKL---ESDGTFIVHSGGADIGTG 689

  Fly   999 VNTKAAQVAAFVLGVPLDQVRVEASNTVNGANSMLTANSMTSEMIGLAVRKACDTLNKR-LAPVK 1062
            ::|...::||.||..|...|.|.:.:|.:.........|..:...|.|.|.|.:.|.:: |....
E. coli   690 LDTVVTKLAAEVLHCPPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGA 754

  Fly  1063 ERLGPRASWVQVLQAAFLQSV--------------------FLIATESYRLGD--IPNYNIFGLS 1105
            :.||...:.||:.....::..                    .|:.|.||...|  .|    :|.:
E. coli   755 QMLGEPVADVQLATPGVVRGKKGEVSFGDIAHKGETGTGFGSLVGTGSYITPDFAFP----YGAN 815

  Fly  1106 LTELELDILTGNHLIRRVDILEDAGESLSPHIDVGQVEGAFVMGLGYYLTEQLVYDRQTGQILTN 1170
            ..|:.::..||...:.:...|.|.|..::|.:.:||:.||.:..:|:.::|:::||.: |..||.
E. coli   816 FAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGATLRAIGHSMSEEIIYDAE-GHPLTR 879

  Fly  1171 RTWNYHPPGAKDIPIDFRIELLQKSPNPVGFMRSKATGEPALCLAV-GALFAMQHAIQSARNDAG 1234
            ...:|..|...|||.||| .:|..|.:.||...:|:..|    :.| ||..|:..||..|   .|
E. coli   880 DLRSYGAPKIGDIPRDFR-AVLVPSDDKVGPFGAKSISE----IGVNGAAPAIATAIHDA---CG 936

  Fly  1235 L-PREWVRLGAPTTPETVV 1252
            : .|||     ..|||.::
E. coli   937 IWLREW-----HFTPEKIL 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AOX2NP_732047.2 PLN02906 24..1251 CDD:215491 220/1056 (21%)
xdhDNP_417357.1 Se_sel_red_Mo 5..955 CDD:132356 220/1059 (21%)

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