DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AOX2 and Aox3

DIOPT Version :9

Sequence 1:NP_732047.2 Gene:AOX2 / 41895 FlyBaseID:FBgn0038348 Length:1264 Species:Drosophila melanogaster
Sequence 2:NP_001008527.2 Gene:Aox3 / 493909 RGDID:1359328 Length:1334 Species:Rattus norvegicus


Alignment Length:1348 Identity:395/1348 - (29%)
Similarity:631/1348 - (46%) Gaps:154/1348 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FNVNGFPYEVQAADYPPDTTLNTFLREHLHLTATKYMCLEGGCGSCVCVIRRRHPVTQEVQSRAA 69
            |.|||.....:.||  |:..|..:||:.:.||.|||.|..|.||:|..:|.|.:|:::::...:|
  Rat    12 FFVNGKKVIERNAD--PEVNLLFYLRKIIQLTGTKYGCGGGDCGACTVMISRYNPISKKISHFSA 74

  Fly    70 NSCLTLLNTCDDAEIMTDEGLGNQLSGYHPIQKRVAQMNGTQCGYCSPGFVMNMYGLLEQHRGQV 134
            .:||..:.:...|.:.|.||:|:..:..||:|:|:|:.:|||||:|:||.||::|.||..| .:.
  Rat    75 AACLVPICSLHGAAVTTVEGIGSTKTRIHPVQERIAKGHGTQCGFCTPGMVMSIYTLLRNH-PEP 138

  Fly   135 SMSQVEDAFGGNLCRCTGYRPILDAMKSFA---------------VDSNVEVP------------ 172
            |..|:.:..|||||||||||||:::.:||:               :|.....|            
  Rat   139 STEQIMETLGGNLCRCTGYRPIVESARSFSPNSACCPMNEKWKCCLDEGKNEPERKNSVCTKLYE 203

  Fly   173 -AESVDIEDSFELLCPRTGQSCKGSCSRPPLRDHGD-SQWYWPKTLTELFGALSQVANGELYM-- 233
             .|...::.:.||:.|..............|...|: :.|..|.||.:|.         ||.|  
  Rat   204 KEEFQPLDPTQELIFPPELMRMAEDSPNTVLTFRGERTTWIAPGTLNDLL---------ELKMEY 259

  Fly   234 ----LVAGNTAHGVYRRPRDIRHFIDVN--MVPELRQYSIETDHLLLGGNVTLTDAMQVFLLAAK 292
                ||.|||..|:..:.:|:.:.|.::  .:.||...:...:.|.||..::||....:......
  Rat   260 PSAPLVIGNTCLGLDMKFKDVSYPIIISPARILELFVVTNTNEGLTLGAGLSLTQVKNILSDVVS 324

  Fly   293 RPGFE----YCAQLWQHFNLIANVPVRNNGTLAGNINIKKQHFEFP-SDVFITFEALDVHVLVYD 352
            |...|    |.| |.:|...:|...:||..:|.|:|..:     .| ||:...|...:..:.|..
  Rat   325 RLPKERTQTYRA-LLKHLRTLAGQQIRNVASLGGHIISR-----LPTSDLNPIFGVGNCKLNVAS 383

  Fly   353 NPSTQRVMNLLTYLGDTTSKL-----VLGGFILKAYPKDRFLFRSYKILPRAQNVHAYVNAGFLI 412
            ...||::.....:|......:     ||....:....|..|: .:::..||.||..|.||||..:
  Rat   384 TEGTQQIPLNDHFLAGVPEAILKPEQVLISVFVPLSRKWEFV-SAFRQAPRQQNAFAIVNAGMRV 447

  Fly   413 EWQDIQHRIVHSARICFGNIRPDYIHDDQVEQLLPGR----DLYDPATVAQIFQELPASLQPEER 473
            .:::..:.|. ...|.:|.|....:.....:||: ||    ::.|.|  .::.:|..:.|   ..
  Rat   448 AFKEDTNTIT-DLSILYGGIGATVVSAKSCQQLI-GRCWDEEMLDDA--GRMIREEVSLL---TA 505

  Fly   474 PPEASPEYRQMLACSLLYKFLLATAPKERVRERFRTGGL-------LLERPLS--SGSQSFETIK 529
            .|....|||:.||.|.|:||.|....:.:.|...|...:       |.:.||:  .|:|||:.:.
  Rat   506 APGGMVEYRKTLAISFLFKFYLDVLKQLKRRNPHRCPDISQKLLQVLEDFPLTMPHGTQSFKDVD 570

  Fly   530 KNY----PVTQPVQKLEGLIQCSGEATYMNDLLTTSNAVHCAFVTAKRVGATIEQIDPSAALQCK 590
            ...    ||.:|:....|:...:|||.:.:|:...:..:..|.||:.:..|.|..:|.|.||...
  Rat   571 SQQPLQDPVGRPIMHQSGIKHATGEAVFCDDMSVLAGELFLAVVTSSKPHARIISLDASEALASP 635

  Fly   591 GVVAFYSAEDIPGSNNFVLVNQLTPEVDEVFVAGRVKYFDQPLGVIAALTHDAAVYAATLVVVTY 655
            |||...:|:|:||.|.        .|.:.::....|....|.:..:||.::..|..|...|.:.|
  Rat   636 GVVDVITAQDVPGDNG--------REEESLYAQDEVICVGQIVCAVAADSYARAKQATKKVKIVY 692

  Fly   656 ARDQRKIFTTMNQVLAEKQTDRIVSTKKDTVEPLKLPPLAPGDVLGRGILELASQYHFTMEPQTT 720
             .|...:..|:...|   |.:..:..:|...:..........|.:..|.:.|..|.||.||.|:.
  Rat   693 -EDMEPMIVTVQDAL---QHESFIGPEKKLEQGNVQLAFQSADQILEGEVHLGGQEHFYMETQSV 753

  Fly   721 IVVPL--DNILQVYCATQWMDATQGAIAHMLKVSVNSIQLQVRRVGGAYGAKVTRGNIVACATAL 783
            .|:|.  |..:.:|.::|....||..:|..|.:..|.|...|:|||||:|.|.::..::|...|:
  Rat   754 RVIPKGEDMEMDIYVSSQDAAFTQEMVARTLGIPKNRITCHVKRVGGAFGGKTSKPGLLASVAAV 818

  Fly   784 VASKLRRPARFVQTIESMMETIGKRWACRSDYEFRARANGSIIMLSNNYYEDSGCNLNEN--VVD 846
            .|.|..||.||:......|...|.|......|......||.|.......|.:.||..:::  |::
  Rat   819 AAQKTGRPIRFILERGDDMLITGGRHPLLGKYRVGFMNNGKIKAADIQLYINGGCTPDDSELVIE 883

  Fly   847 FLTLPILRNVYNLTDANYRTQGSAIRTDAPSSTWCRAPGSAEGIAMTETALEHIAFTCQLDPADV 911
            :..|. |.|.|.:  .|.|.:|...:|:.||:|..|..|..:|..:|||.:..:|..|.|.|..|
  Rat   884 YALLK-LENAYKI--PNLRVRGRVCKTNLPSNTAFRGFGFPQGAFVTETWVSAVAAKCHLPPEKV 945

  Fly   912 RLVNL-------------QPGNKMVQLLPKFLASTEYHKRRDQINLFNSQNRWRKRGLGLALMSF 963
            |.:|:             .|.| :::.....:.::.|:.|:..::.||.|:.|:|||:.:..|.|
  Rat   946 RELNMYKTIDRTIHKQEFDPTN-LIKCWETCMENSSYYSRKKAVDEFNQQSFWKKRGIAIIPMKF 1009

  Fly   964 PLNTTVAFNYPVTVAIYHE---------DGSVVISHGGIEIGQGVNTKAAQVAAFVLGVPLDQVR 1019
                  :..:|.|  .||:         ||||:::|||:|:|||:|||..|||:..|.:|:..:.
  Rat  1010 ------SVGFPKT--FYHQAAALVQIYTDGSVLVAHGGVELGQGINTKMIQVASRELKIPMSYIH 1066

  Fly  1020 VEASNTVNGANSMLTANSMTSEMIGLAVRKACDTLNKRLAPVKERLGPRASWVQVLQAAFLQSVF 1084
            ::..||:...|::.|..|..:::.|.||:.||..|.|||.|:..: .|...|.:.:..||:||:.
  Rat  1067 LDEMNTMTVPNTITTGGSTGADVNGRAVQNACQILMKRLEPIISQ-NPNGDWEEWINEAFIQSIS 1130

  Fly  1085 LIATESYR-----------LGDIPNYNIFGLSLTELELDILTGNHLIRRVDILEDAGESLSPHID 1138
            |.||..:|           .|||..|.:||.:.:|:|:|.|||.|...|.||:.|...|::|.:|
  Rat  1131 LSATGYFRGYQADMDWEKGEGDIYPYFVFGAACSEVEIDCLTGAHKNIRTDIVMDGSFSINPAVD 1195

  Fly  1139 VGQVEGAFVMGLGYYLTEQLVYDRQTGQILTNRTWNYHPPGAKDIPIDFRIELLQKSPNPVGFMR 1203
            :||:|||||.|||.|..|:|.|..: |.:.|.....|......|||.:|.:.||..:.||.....
  Rat  1196 IGQIEGAFVQGLGLYTLEELKYSPE-GVLYTRGPHQYKIASVSDIPEEFHVSLLTPTQNPKAIYS 1259

  Fly  1204 SKATGEPALCLAVGALFAMQHAIQSARNDAGLPREWVRLGAPTTPETV 1251
            ||..||..:.|.....||:..|:.:||.:.|||. .:.:.:|.|.|.:
  Rat  1260 SKGLGEAGMFLGSSVFFAIAAAVAAARKERGLPL-ILAINSPATAEVI 1306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AOX2NP_732047.2 fer2 3..84 CDD:238126 27/78 (35%)
PLN02906 24..1251 CDD:215491 388/1327 (29%)
Fer2_2 86..159 CDD:280048 38/72 (53%)
FAD_binding_4 206..366 CDD:303082 43/173 (25%)
CO_deh_flav_C 391..497 CDD:281449 32/109 (29%)
Ald_Xan_dh_C 548..655 CDD:214971 29/106 (27%)
Ald_Xan_dh_C2 702..1184 CDD:280834 169/518 (33%)
Aox3NP_001008527.2 mam_aldehyde_ox 9..1333 CDD:132014 395/1348 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D48717at2759
OrthoFinder 1 1.000 - - FOG0000201
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100184
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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