DRSC/TRiP Functional Genomics Resources

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Protein Alignment AOX2 and xdh-1

DIOPT Version :9

Sequence 1:NP_732047.2 Gene:AOX2 / 41895 FlyBaseID:FBgn0038348 Length:1264 Species:Drosophila melanogaster
Sequence 2:NP_502747.1 Gene:xdh-1 / 178381 WormBaseID:WBGene00010083 Length:1358 Species:Caenorhabditis elegans


Alignment Length:1373 Identity:397/1373 - (28%)
Similarity:661/1373 - (48%) Gaps:180/1373 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SIKFNVNGFPYEVQAADYPPDTTLNTFLREHLHLTATKYMCLEGGCGSCVCVIRRRHPVTQEVQS 66
            ::.|.|||  ..|:..|..|..||.|:||:.|.||.||..|.|||||:|..:|  .|....|::.
 Worm    15 NLVFYVNG--KRVEEKDVDPKMTLATYLRDKLKLTGTKIGCNEGGCGACTIMI--SHIENGEIKH 75

  Fly    67 RAANSCLTLLNTCDDAEIMTDEGLG----NQLSGYHPIQKRVAQMNGTQCGYCSPGFVMNMYGLL 127
            .:|||||..:.......:.|.||:|    |:|   ||:|:|:|:.:|:|||:|:|||||.||.||
 Worm    76 FSANSCLMPVCGVFGKAVTTVEGIGSVAKNRL---HPVQERLAKAHGSQCGFCTPGFVMAMYALL 137

  Fly   128 EQHRGQVSMSQVEDAFGGNLCRCTGYRPILDAMKSFAVDSNVEVPAESVDIEDSFELLCPRTGQS 192
             ::....::|.:.....|||||||||||||:|..|||||.:..:.....:.....|..|.....:
 Worm   138 -RNNPNPTISDINLGLQGNLCRCTGYRPILEAFYSFAVDESGTLKVTEENGCGMGENCCKVKKTA 201

  Fly   193 CKGS-----------------------CS----------RPPLR-----------DHGDSQWYWP 213
            |.||                       |.          .|.|:           ||..::||.|
 Worm   202 CGGSDETTPGYTGGERKRKIQLSDMSDCKPYDPTQELIFPPELKLHGYESMSFAYDHHHTKWYQP 266

  Fly   214 KTLTELFGALSQVANGELYMLVAGNTAHGVYRRPR--DIRHFIDVNMVPELRQYSIETDHLLLGG 276
            .:..:|.....::.:..   |::||:...:..:.|  |:...|:...|..|.:..:|.|.:.:|.
 Worm   267 VSYDDLLSLKRELPHAR---LISGNSELAIELKFRFIDLPAVINPRQVKVLHEKHLENDGVYMGT 328

  Fly   277 NVTLTDAMQVFLLAAKRPGFEYCAQLWQH----FNLIANVPVRNNGTLAGNINIKKQHFEFPSDV 337
            .::|||.....:...|....|..|.| :|    .:..|.:.|||..::||||.......:. :.:
 Worm   329 GMSLTDMDNYSVQLMKDLPREQTAVL-KHVHEMLHWFAGIHVRNVASVAGNIATASPISDL-NPI 391

  Fly   338 FITFEALDVHVLVYDNPS--TQRV-MNLLTYLG--------DTTSKLVLGGFILKAYPKDRFLFR 391
            ::...||    :|.|:.:  .:|| ::...:||        |...|.|:...:     ::...|.
 Worm   392 WMASNAL----VVLDSEARGEKRVHIDEKFFLGYRKTVIQQDEIIKAVIVPLL-----EENEHFA 447

  Fly   392 SYKILPRAQNVHAYVNAGFLIEWQDIQHRIVHSARICFGNIRP-DYIHDDQVEQLLPGRDLYDPA 455
            :||...|.::..|.|...||:: .|.:..:|...||.:|.:.| ..:....:|:|:..:      
 Worm   448 AYKQAQRREDDIAIVTGAFLVK-LDPKTLVVEKIRISYGGMAPTTKLALTTMEKLIGEK------ 505

  Fly   456 TVAQIFQELPASLQPEE-RPPEASP----EYRQMLACSLLYKFLLATAPKERVRE-RFRTGGLLL 514
             .:|.|.:....|..:| :.|...|    :||..||.|..:||.|..:.|..:.| ::....:.:
 Worm   506 -WSQTFLDKALGLLSDELKLPAGVPGGMSQYRLSLALSFFFKFFLGVSKKLELTEIKYVDADVKI 569

  Fly   515 ERPLSS---GSQSFETIKKNY----PVTQPVQKLEGLIQCSGEATYMNDLLTTSNAVHCAFVTAK 572
            .:.:..   .:|.::.:|.|.    |:.:|::.:.|....:|||.|.:| :..::..|.|||.:.
 Worm   570 GQNVPETLYATQLYQEVKANQPAHDPLGRPIKHVSGDKHTTGEAVYCDD-INVADCNHIAFVLSP 633

  Fly   573 RVGATIEQIDPSAALQCKGVVAFYSAEDI-PGSNNFVLVNQLTPEVD-EVFVAGRVKYFDQPLGV 635
            ....|:..||.:|||:..|||....|.|: .|:       |:....| .|||...:.:..||:..
 Worm   634 IAHGTLNSIDYTAALEIDGVVGTIDASDVTTGA-------QMGHHSDTPVFVKETITFHGQPIAA 691

  Fly   636 IAALTHDAAVYAATLVVVTYARDQRKIFTTMNQVL-AEKQTDR---IVSTKKDTVEPLKLPPLAP 696
            |.|..|:.|..||:||.:.|:.:  |...|:.|.| ||....:   |.|:..|..:.:| ...:.
 Worm   692 IVATDHEIARKAASLVKLDYSVE--KPIVTIKQALEAESFVFKHFVIHSSLNDNEQVIK-SDWSK 753

  Fly   697 GDVLGRGILELASQYHFTMEPQTTIVVP-LDNILQVYCATQWMDATQGAIAHMLKVSVNSIQLQV 760
            .|.:..|.:::..|.||.:|.|..||:| .|:.|::..:.|.::..|..:|..|.::.:.|..:|
 Worm   754 YDRIVEGSIDMGGQEHFYLETQQCIVIPHEDDELEIIISNQCVNDVQIEVAKCLGMAQHKISTKV 818

  Fly   761 RRVGGAYGAKVTRGNIVACATALVASKLRRPARF-VQTIESMMETIGKRWACRSDYEFRARANGS 824
            :|:||.:|.|.:.|.|:|...:|.|.|..||.:| .:..:.|..| |.|......|:.....||.
 Worm   819 KRIGGGFGGKESTGAILAVPASLAAKKFGRPMKFKFERFDDMAIT-GTRHPFTLQYKLAVDENGK 882

  Fly   825 IIMLSNNYYEDSGCNLNENVVDFLTLPILR-------NVYNLTDANYRTQGSAIRTDAPSSTWCR 882
            .:.|......:||     :.:| |::.:::       |||...:|:  ..|...:|:..|:|..|
 Worm   883 FLDLDYTALSNSG-----HTID-LSMGVMQRAMVHADNVYKFENAD--ITGKMCKTNLASNTAFR 939

  Fly   883 APGSAEGIAMTETALEHIAFTCQLDPADVRLVNL-QPGN-----------KMVQLLPKFLASTEY 935
            ..|..:|:..||..::|:|.....:..:||:.|. :.|:           .:.:...:...:::|
 Worm   940 GFGGPQGMFGTEIMVKHVAEKFGFNHDEVRVKNFYKEGDCTPFGMHLNQCNVTRTWDECRKNSDY 1004

  Fly   936 HKRRDQINLFNSQNRWRKRGLGLALMSFPLNTTVAF-----NYPVTVAIYHEDGSVVISHGGIEI 995
            ..|.:::..||..|::||||:.|.    |....:.|     |....:.:.:.||||::||||:|:
 Worm  1005 DNRLEEVKKFNDSNKFRKRGIYLT----PTRFGIGFGLKQLNQAGALVLVYTDGSVLVSHGGMEM 1065

  Fly   996 GQGVNTKAAQVAAFVLGVPLDQVRVEASNTVNGANSMLTANSMTSEMIGLAVRKACDTLNKRLAP 1060
            |||::||..|:||..|.:|::::.:..::|....|:..||.|:.|:|.||||:.||..:|:||..
 Worm  1066 GQGLHTKILQIAARCLEIPIERIHIHDTSTDKVPNASATAASVGSDMNGLAVQDACRQINERLER 1130

  Fly  1061 VKERLGPRASWVQVLQAAFLQSVFLIATE------------SYRLGDIPNYNIFGLSLTELELDI 1113
            .| :|.|..:|...::||::..|.|.|:.            :.:..::..|:::|.:..|:|:|.
 Worm  1131 FK-KLDPNGTWDDWVKAAYVDRVSLSASGFGIIHHEPVDFFNGKGAELFGYSVYGTACCEVEIDC 1194

  Fly  1114 LTGNHLIRRVDILEDAGESLSPHIDVGQVEGAFVMGLGYYLTEQLVYDRQTGQILTNRTWNYHPP 1178
            |||:|.:.|.||:.|.||||:|.||:||:||||:.|.|.:..|::.. |..|..||....||..|
 Worm  1195 LTGDHHLLRTDIVMDVGESLNPAIDIGQIEGAFIQGYGLFTMEEIKI-RPDGIRLTRGPGNYKIP 1258

  Fly  1179 GAKDIPIDFRIELLQKSPNPVGFMRSKATGEPALCLAVGALFAMQHAIQSARNDAGLPREWVRLG 1243
            .|.|.|..|.:.||..|.|.:|...|||.|||.|.|...|.||::.|:::.|...| ..::....
 Worm  1259 SADDAPRHFNVSLLGNSSNKMGIFSSKAIGEPPLFLGSCAFFAIREAVRAYRIQNG-NADYFVFH 1322

  Fly  1244 APTTPETV 1251
            :|.|||.:
 Worm  1323 SPATPERI 1330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AOX2NP_732047.2 fer2 3..84 CDD:238126 32/80 (40%)
PLN02906 24..1251 CDD:215491 390/1349 (29%)
Fer2_2 86..159 CDD:280048 39/76 (51%)
FAD_binding_4 206..366 CDD:303082 37/168 (22%)
CO_deh_flav_C 391..497 CDD:281449 29/111 (26%)
Ald_Xan_dh_C 548..655 CDD:214971 36/108 (33%)
Ald_Xan_dh_C2 702..1184 CDD:280834 157/519 (30%)
xdh-1NP_502747.1 Fer2 18..86 CDD:278537 32/71 (45%)
PLN02906 34..1340 CDD:215491 390/1352 (29%)
Fer2_2 95..168 CDD:280048 39/76 (51%)
FAD_binding_5 260..440 CDD:279309 42/188 (22%)
CO_deh_flav_C 447..549 CDD:281449 28/109 (26%)
Ald_Xan_dh_C 610..715 CDD:279635 37/114 (32%)
Ald_Xan_dh_C2 755..1264 CDD:280834 158/523 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D48717at2759
OrthoFinder 1 1.000 - - FOG0000201
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100184
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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