DRSC/TRiP Functional Genomics Resources

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Protein Alignment AOX1 and xdhC

DIOPT Version :10

Sequence 1:NP_650475.1 Gene:AOX1 / 41894 FlyBaseID:FBgn0267408 Length:1273 Species:Drosophila melanogaster
Sequence 2:NP_417344.1 Gene:xdhC / 945148 ECOCYCID:G7487 Length:159 Species:Escherichia coli


Alignment Length:158 Identity:55/158 - (34%)
Similarity:77/158 - (48%) Gaps:20/158 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TINGTSHEVNLSALPADISLNTFIREYAGLTGTKFMCQEGGCGVCVCTLTGIHPETGELRTWAVN 70
            ||||...:  |.|.|. ..|:..:|| .||...|..|..|.||.|...:.|.          |::
E. coli    12 TINGMPFQ--LHAAPG-TPLSELLRE-QGLLSVKQGCCVGECGACTVLVDGT----------AID 62

  Fly    71 SCLTLLNTCLGLEVTTSEG--LGNKRVGYHAIQQRLAKMNGTQCGYCSPGIVMNMYGLL-KSKGG 132
            |||.|.....|.|:.|.||  .|.|   ...:||..||....|||:|:||::|....:| |.:..
E. coli    63 SCLYLAAWAEGKEIRTLEGEAKGGK---LSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAKPREK 124

  Fly   133 KVTMEEVENSFGGNICRCTGYRPILDAM 160
            .:|:.|:.....||:||||||:.|::.:
E. coli   125 PLTITEIRRGLAGNLCRCTGYQMIVNTV 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AOX1NP_650475.1 PLN02906 28..1259 CDD:215491 47/136 (35%)
xdhCNP_417344.1 PRK09908 1..159 CDD:182139 55/158 (35%)

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