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Protein Alignment CG5213 and SR34b
DIOPT Version :9
Sequence 1: | NP_650473.1 |
Gene: | CG5213 / 41892 |
FlyBaseID: | FBgn0038345 |
Length: | 251 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001328194.1 |
Gene: | SR34b / 828027 |
AraportID: | AT4G02430 |
Length: | 292 |
Species: | Arabidopsis thaliana |
Alignment Length: | 95 |
Identity: | 37/95 - (38%) |
Similarity: | 56/95 - (58%) |
Gaps: | 6/95 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 125 TSSSLYVGNLPTYMDEKKVRELFATYGNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVAKYGMD 189
:|.::||||||..:.|::|.:||:.||.:|.::| |...|..|.||::||..|||:.|.||.|
plant 5 SSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDL---KIPPRPPGYAFVEFEDARDADDAIYGRD 66
Fly 190 RYMIEGASRPLTVKFVEREKKGSSSTSSGS 219
.|..:| ..|.|:.....:: ||..:.||
plant 67 GYDFDG--HHLRVELAHGGRR-SSHDARGS 93
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG5213 | NP_650473.1 |
RRM1_Hu_like |
41..117 |
CDD:240821 |
|
RRM |
128..202 |
CDD:214636 |
31/73 (42%) |
SR34b | NP_001328194.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR23147 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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