Protein Alignment CG5213 and CP29

DIOPT Version :9

• Sequence 1: NP_650473.1
• Gene: CG5213 / 41892
• FlyBaseID: FBgn0038345
• Length: 251
• Species: Drosophila melanogaster
• Sequence 2: NP_001190079.1
• Gene: CP29 / 824514
• AraportID: AT3G53460
• Length: 363
• Species: Arabidopsis thaliana
• Alignment Length: 288
• Identity: 57/288 - (19%)
• Similarity: 99/288 - (34%)
• Gaps: 103/288 - (35%)

  Fly    21 MFQTG---RPVDPPPPLPNLRMKTNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISC 82
            ||..|   .||:.....|:|:    |.:..|..::..::|.:||...|.:...::|..:.||.|.
plant    80 MFADGDDSAPVERNSFSPDLK----LFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSR 140

  Fly    83 CYGFVDYVSERQAAAAVNGMDGYETR---------------------GKRLKV-----------A 115
            .:|||...:..:..||....:||.:|                     |:.|:|           :
plant   141 GFGFVTMSTAAEVEAAAQQFNGYVSRYLCSLLCLYLLIRVLCGLEFEGRPLRVNAGPPPPKREES 205

  Fly   116 FAR----------------------------------------------------PSEYESTSSS 128
            |:|                                                    .|.|.|.|.|
plant   206 FSRGPRSGGYGSERGGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGSGS 270

  Fly   129 ---------LYVGNLPTYMDEKKVRELFATYGNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVA 184
                     ||||||...:|:..:..||...|.:|:..::..:.:.||:|..|:.....::.:.|
plant   271 GSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 335

  Fly   185 KYGMDRYMIEGASRPLTVKFVE-REKKG 211
            ...::...::|  |.:.|...| |..:|
plant   336 INSLNGADLDG--RQIRVSEAEARPPRG 361

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5213	NP_650473.1	RRM1_Hu_like	41..117	CDD:240821	21/107 (20%)
		RRM	128..202	CDD:214636	19/82 (23%)
CP29	NP_001190079.1	RRM_SF	100..194	CDD:302621	20/97 (21%)
		RRM_HP0827_like	279..355	CDD:240845	19/77 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.920