Sequence 1: | NP_650473.1 | Gene: | CG5213 / 41892 | FlyBaseID: | FBgn0038345 | Length: | 251 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012814656.1 | Gene: | hnrnpab / 734098 | XenbaseID: | XB-GENE-6042555 | Length: | 326 | Species: | Xenopus tropicalis |
Alignment Length: | 230 | Identity: | 59/230 - (25%) |
---|---|---|---|
Similarity: | 97/230 - (42%) | Gaps: | 26/230 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 ESSVPTLCWGYAG-----IRGMFQTGRPVDPPPPLPNLRMKTNLILNYLPQDMTESELHRLFSKF 64
Fly 65 GEIRKAKIIRHRRTGISCCYGFVDYVSERQAAAAVNGMDGYETR--GKRL--KVAFARPSEYEST 125
Fly 126 SSSLYVGNLPTYMDEKKVRELFATYGNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVAKYGMDR 190
Fly 191 --YMIEGASRPLTV---KFVEREKKGSSSTSSGSQ 220 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5213 | NP_650473.1 | RRM1_Hu_like | 41..117 | CDD:240821 | 22/79 (28%) |
RRM | 128..202 | CDD:214636 | 20/75 (27%) | ||
hnrnpab | XP_012814656.1 | CBFNT | 1..52 | CDD:311868 | 7/24 (29%) |
RRM1_hnRNPAB | 66..140 | CDD:241201 | 21/76 (28%) | ||
RRM2_hnRNPAB | 145..224 | CDD:241028 | 20/84 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |