DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG5213 and hnrnpc

DIOPT Version :9

Sequence 1:	NP_650473.1	Gene:	CG5213 / 41892	FlyBaseID:	FBgn0038345	Length:	251	Species:	Drosophila melanogaster
Sequence 2:	XP_012815605.1	Gene:	hnrnpc / 448664	XenbaseID:	XB-GENE-489141	Length:	343	Species:	Xenopus tropicalis

Alignment Length:	208	Identity:	53/208 - (25%)
Similarity:	82/208 - (39%)	Gaps:	59/208 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    80 ISCCYGFVDYVSERQ--------AAAAVNGMDGYETRGKRLKVAFARPSEYESTSSSLYVGNLPT 136
            :.|.:.|..:.|:|:        |..|..|.|       .:.......::..|.:|.:::|||.|
Frog    29 LDCFHNFSPFFSQRRIFFETSTTAKIASPGSD-------MMASNVTNKTDPRSMNSRVFIGNLNT 86

  Fly   137 YMDEK-KVRELFATYGNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVAKYGMDRYMIEG----- 195
            .:.:| .|..:|:.||.||..::  ||      |.||:|:...|:|..|..|.|..||.|
Frog    87 LVVKKADVEAIFSKYGKIVGCSV--HK------GYAFVQYSNERNARTAVAGEDGRMIAGQVMDI 143

  Fly   196 --ASRPLTVKFVEREKKG---SSSTSSGS--------------QYKDKRKSSPPPYKR------R 235
              |:.|.    ..|.|.|   |::...||              .|...|...|||..|      |
Frog   144 NLAAEPK----ANRSKTGVKRSAADMYGSSFDLEYDFQRDYYDSYSATRVPPPPPIARAVVPSKR 204

  Fly   236 ERTNDHHVSKRSR 248
            :|.:. :.|:|.:
Frog   205 QRVSG-NASRRGK 216

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG5213	NP_650473.1	RRM1_Hu_like	41..117	CDD:240821	8/44 (18%)
CG5213	NP_650473.1	RRM	128..202	CDD:214636	27/81 (33%)
hnrnpc	XP_012815605.1	RRM_hnRNPC	76..146	CDD:241047	26/77 (34%)
hnrnpc	XP_012815605.1	APG6_N	<229..322	CDD:375248
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910