Protein Alignment CG5213 and trv

DIOPT Version :9

• Sequence 1: NP_650473.1
• Gene: CG5213 / 41892
• FlyBaseID: FBgn0038345
• Length: 251
• Species: Drosophila melanogaster
• Sequence 2: NP_001163754.3
• Gene: trv / 43362
• FlyBaseID: FBgn0085391
• Length: 651
• Species: Drosophila melanogaster
• Alignment Length: 200
• Identity: 48/200 - (24%)
• Similarity: 85/200 - (42%)
• Gaps: 48/200 - (24%)

  Fly    31 PPP---------------------LPNLRMKTNLILNYLPQDMTESELHRLFSKFGEIRKAKIIR 74
            |||                     :|.|..:.::.:..|..::...:|...|:.||||...:::|
  Fly   281 PPPHAARTEGGGQDMEDSDEEMEYMPPLHKQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVR 345

  Fly    75 HRRTGISCCYGFVDYVSERQAAAAVNGMDG--YETRGKRLKVAFARP-------------SEYES 124
            ..:|..|..||||.::.:.:|.:|:..|:|  ..:|..|...|..:|             ..|..
  Fly   346 DPQTLKSKGYGFVSFIKKSEAESAITAMNGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQ 410

  Fly   125 TSSS---LYVGNLP---TYMDEKKVRELFATYGNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEV 183
            :|.|   :|||.:.   |.:.|:.:::.||.||.|.::.:.:.|      |.||::|.....|..
  Fly   411 SSPSNCTVYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDK------GYAFVRFSTKEAATH 469

  Fly   184 AKYGM 188
            |..|:
  Fly   470 AIVGV 474

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5213	NP_650473.1	RRM1_Hu_like	41..117	CDD:240821	21/77 (27%)
		RRM	128..202	CDD:214636	19/66 (29%)
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:240799	20/73 (27%)
		RRM3_TIA1_like	416..491	CDD:240800	18/64 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910