Protein Alignment CG5213 and B52

DIOPT Version :9

• Sequence 1: NP_650473.1
• Gene: CG5213 / 41892
• FlyBaseID: FBgn0038345
• Length: 251
• Species: Drosophila melanogaster
• Sequence 2: NP_001014619.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Alignment Length: 252
• Identity: 63/252 - (25%)
• Similarity: 98/252 - (38%)
• Gaps: 75/252 - (29%)

  Fly    48 LPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAAAVNGMDGYETRGKRL 112
            ||..:.|.:|.|.|..:|..|...|    :.|    ||||::...|.|..||..::|.|..|:|:
  Fly    11 LPYGVRERDLERFFKGYGRTRDILI----KNG----YGFVEFEDYRDADDAVYELNGKELLGERV 67

  Fly   113 KVAFARPS-------EYE--------------------STSSSLY-----------VGNLPTYMD 139
            .|..||.:       .|:                    |.|||.|           |.||.:.:.
  Fly    68 VVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSRVS 132

  Fly   140 EKKVRELFATYGNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVAKYGMDRYMIEGASRPLTVKF 204
            .:.:::.....|.:...:  .|| ..|:.||  ::|..:.|.:.|...:|...:.|.    .:..
  Fly   133 WQDLKDYMRQAGEVTYAD--AHK-QRRNEGV--VEFASLSDMKTAIEKLDDTELNGR----RIHL 188

  Fly   205 VEREKKG------------SSSTSSGSQYKDKRKSSPPPYKRRERTNDHHVSK-RSR 248
            ||..:.|            |.|:||.|:.:.:|:|       |.|.:.|..|| |||
  Fly   189 VEDRRGGRSGGGGGSGRGRSRSSSSRSRSRSRRRS-------RSRRSSHSRSKSRSR 238

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5213	NP_650473.1	RRM1_Hu_like	41..117	CDD:240821	23/68 (34%)
		RRM	128..202	CDD:214636	16/84 (19%)
B52	NP_001014619.2	RRM1_SRSF4_like	5..74	CDD:240783	24/70 (34%)
		RRM2_SRSF4_like	120..191	CDD:241044	15/79 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910