Protein Alignment CG5213 and ssx

DIOPT Version :9

• Sequence 1: NP_650473.1
• Gene: CG5213 / 41892
• FlyBaseID: FBgn0038345
• Length: 251
• Species: Drosophila melanogaster
• Sequence 2: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Alignment Length: 215
• Identity: 79/215 - (36%)
• Similarity: 116/215 - (53%)
• Gaps: 13/215 - (6%)

  Fly    41 TNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAAAVNGMDGY 105
            ||||:||||||||:.||:.|||..|.|...||:|..:||.|..||||||.:|..:..|:..::|:
  Fly    93 TNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGF 157

  Fly   106 ETRGKRLKVAFARPSEYESTSSSLYVGNLPTYMDEKKVRELFATYGNIVDVNLLRHKFNNRSRGV 170
            ..|.|||||::|||.......::|||.||...:::..:..:|:.||.||..|:||.|...|.|||
  Fly   158 YVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGV 222

  Fly   171 AFLQFELVRDAEVAKYGMDRYMIEGASRPLTVKFVEREKK------------GSSSTSSGSQYKD 223
            ||:::....:|:.|...::..:.||.|:|:.|:..|...|            |:.....|..:..
  Fly   223 AFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAAQFMAQIGGGNGGGGGGPPHMG 287

  Fly   224 K-RKSSPPPYKRRERTNDHH 242
            . ....||.:......|:||
  Fly   288 PGGPMHPPHHHNNHHHNNHH 307

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5213	NP_650473.1	RRM1_Hu_like	41..117	CDD:240821	40/75 (53%)
		RRM	128..202	CDD:214636	26/73 (36%)
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	43/79 (54%)
		RRM_SF	179..257	CDD:302621	27/77 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439579
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E33208_3BKYN
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	1	1.000	-	-		mtm1072
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	6	5.750