Sequence 1: | NP_650473.1 | Gene: | CG5213 / 41892 | FlyBaseID: | FBgn0038345 | Length: | 251 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001040945.1 | Gene: | hrpa-1 / 177101 | WormBaseID: | WBGene00001999 | Length: | 347 | Species: | Caenorhabditis elegans |
Alignment Length: | 215 | Identity: | 49/215 - (22%) |
---|---|---|---|
Similarity: | 81/215 - (37%) | Gaps: | 60/215 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 36 NLRMKTNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAAAVN 100
Fly 101 G----MDGYETRGKRLKVAFARPSEYESTSSS------LYVGNLPTYMDEKKVRELFATYGNIVD 155
Fly 156 VNLLRHKFNNRSRGVAFLQFE--------------------------LVRDAEVAKYGMDRYMIE 194
Fly 195 GASRPLTVKFVEREKKGSSS 214 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5213 | NP_650473.1 | RRM1_Hu_like | 41..117 | CDD:240821 | 19/79 (24%) |
RRM | 128..202 | CDD:214636 | 20/105 (19%) | ||
hrpa-1 | NP_001040945.1 | RRM1_hnRNPA_like | 24..101 | CDD:241022 | 20/81 (25%) |
RRM2_hnRNPA_like | 115..187 | CDD:240774 | 13/71 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |