Protein Alignment CG5213 and rsp-3

DIOPT Version :9

• Sequence 1: NP_650473.1
• Gene: CG5213 / 41892
• FlyBaseID: FBgn0038345
• Length: 251
• Species: Drosophila melanogaster
• Sequence 2: NP_001370111.1
• Gene: rsp-3 / 176688
• WormBaseID: WBGene00004700
• Length: 258
• Species: Caenorhabditis elegans
• Alignment Length: 248
• Identity: 56/248 - (22%)
• Similarity: 94/248 - (37%)
• Gaps: 61/248 - (24%)

  Fly    48 LPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAAAVNGMDGYETRGKRL 112
            ||.|:.|.|:..:|.|:|.|:...|    ::|....:.||::...|.|..||...||||..|:|:
 Worm    16 LPGDVREKEVEDIFHKYGRIKYVDI----KSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRI 76

  Fly   113 KVAF----------ARPSE----------------------YESTSSSLYVGNLPTYMDEKKVRE 145
            :|.|          .||.:                      ...|...:.|..||.....:.:::
 Worm    77 RVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVEGLPPTGSWQDLKD 141

  Fly   146 LFATYGNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVAKYGMDRYMI---EGASRPLTVKFVER 207
            .....|::...::.|.       |...::|....|.:.|...:|....   ||.:..:.|:
 Worm   142 HMRDAGDVCYADVARD-------GTGVVEFTRYEDVKYAVRKLDDTKFRSHEGETAYIRVR---- 195

  Fly   208 EKKGSSSTSSGSQYKDK---------RKSSPPPYKRRERTNDHHVSK-RSRDS 250
             :..||...||...:|:         |::||....||.|:.....|: |||.:
 Worm   196 -EDNSSGGGSGGGGRDRSRSRSPRAERRASPKYSPRRSRSRSRSRSRSRSRSA 247

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5213	NP_650473.1	RRM1_Hu_like	41..117	CDD:240821	25/78 (32%)
		RRM	128..202	CDD:214636	12/76 (16%)
rsp-3	NP_001370111.1	RRM1_SRSF1_like	10..80	CDD:409775	24/67 (36%)
		RRM2_SRSF1_like	123..196	CDD:410013	13/84 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23147
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100