Protein Alignment maca and Pabpc1

DIOPT Version :10

• Sequence 1: NP_650473.1
• Gene: maca / 41892
• FlyBaseID: FBgn0038345
• Length: 251
• Species: Drosophila melanogaster
• Sequence 2: NP_599180.1
• Gene: Pabpc1 / 171350
• RGDID: 619838
• Length: 636
• Species: Rattus norvegicus
• Alignment Length: 207
• Identity: 54/207 - (26%)
• Similarity: 96/207 - (46%)
• Gaps: 29/207 - (14%)

  Fly    41 TNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAAAVNGMDGY 105
            ||:.:....:||.:..|..||.|||.....|::.. .:|.|..:|||.:.....|..||:.|:|.
  Rat   191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGK 254

  Fly   106 ETRGKRLKVAFA--------------------RPSEYESTSSSLYVGNLPTYMDEKKVRELFATY 150
            |..||::.|..|                    |.:.|:..  :|||.||...:|::::|:.|:.:
  Rat   255 ELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV--NLYVKNLDDGIDDERLRKEFSPF 317

  Fly   151 GNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVAKYGMDRYMIEGASRPLTVKFVEREKKGSSST 215
            |.|....::..  ..||:|..|:.|....:|..|...|:..::  |::||.|...:|:::..:..
  Rat   318 GTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--ATKPLYVALAQRKEERQAHL 378

  Fly   216 SSGSQYKDKRKS 227
            :  :||..:..|
  Rat   379 T--NQYMQRMAS 388

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
maca	NP_650473.1	sex-lethal	<41..>210	CDD:273740	51/188 (27%)
Pabpc1	NP_599180.1	PABP-1234	11..615	CDD:130689	54/207 (26%)
		UNR-binding. /evidence=ECO:0000250	166..289		27/98 (28%)