Sequence 1: | NP_650473.1 | Gene: | CG5213 / 41892 | FlyBaseID: | FBgn0038345 | Length: | 251 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_317010.3 | Gene: | AgaP_AGAP008433 / 1277542 | VectorBaseID: | AGAP008433 | Length: | 526 | Species: | Anopheles gambiae |
Alignment Length: | 223 | Identity: | 52/223 - (23%) |
---|---|---|---|
Similarity: | 89/223 - (39%) | Gaps: | 44/223 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 GIRGMFQTGRPVDPPP----------------PLPNL----RMKTNLILNYLPQDMTESELHRLF 61
Fly 62 SKFGEIRKAKIIRHRRT----GISCCYGFVDYVSERQAAAAVNGMDGYETRGKRLKVAFAR---- 118
Fly 119 ---------PSEYESTSSSLYVGNLPTYMDEKKVRELFATYGNIVDVNLLRHKFNNRSRGVAFLQ 174
Fly 175 FELVRDAEVAKYGMDRYMIEGASRPLTV 202 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5213 | NP_650473.1 | RRM1_Hu_like | 41..117 | CDD:240821 | 17/79 (22%) |
RRM | 128..202 | CDD:214636 | 22/73 (30%) | ||
AgaP_AGAP008433 | XP_317010.3 | PRP38_assoc | <40..109 | CDD:289628 | |
SF-CC1 | 53..511 | CDD:273721 | 52/223 (23%) | ||
RRM1_RBM39_like | 172..244 | CDD:240729 | 16/76 (21%) | ||
RRM2_RBM23_RBM39 | 271..343 | CDD:240730 | 23/74 (31%) | ||
RBM39linker | 360..436 | CDD:292157 | |||
RRM3_RBM39_like | 418..502 | CDD:240731 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |