DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obe and SLH1

DIOPT Version :9

Sequence 1:NP_650472.2 Gene:obe / 41891 FlyBaseID:FBgn0038344 Length:2183 Species:Drosophila melanogaster
Sequence 2:NP_011787.4 Gene:SLH1 / 853187 SGDID:S000003503 Length:1967 Species:Saccharomyces cerevisiae


Alignment Length:2137 Identity:868/2137 - (40%)
Similarity:1239/2137 - (57%) Gaps:273/2137 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 QTF--DRKKTQIHDCVQAIGDLLED--HERSALKRWRQTHHKVPGVGPLWGAHIHVKCTPSEWMD 180
            |||  ||.|..:.|....:..:.:|  ::|:.|....|..:.       |....      .|:.|
Yeast    25 QTFNLDRSKISLPDFDDELKKVQKDEQNQRTELTVLSQDRND-------WDDIF------EEFKD 76

  Fly   181 ISLLTDLAPDALLKNRTVNKFSMKHTTKAAPVASTSSEAAKLSPELQTLLEISAKLDDEHLIIRV 245
            ||.       |.|:: .::.:..|:      ..:...:..||..|.:|.|..:..|:....::  
Yeast    77 ISF-------AQLQS-IIDSYKTKN------AVAVYKKIGKLINEAETTLSSNVLLETVLQMV-- 125

  Fly   246 GDILGSQRSSEVLQNELMEILGFDYFELVEKLLMERDKIARQLDQFATRSRRVMEVKQKRMEAAA 310
                 .:...:.|:.||::.||....:||..||..|                       ||..|.
Yeast   126 -----YKHQKQELEKELLDFLGTGNIDLVSLLLQHR-----------------------RMIVAT 162

  Fly   311 SGGAAERRPTVASAVVVQSAQEKQLSKMQRREEKKLQRIMRSIKDEEAEDDPNCAVAVSVQQLRM 375
                    |...:.:::::|       :....|...|:.:|:...:.|||..|            
Yeast   163 --------PIETTILLIKNA-------VNSTPEFLTQQDIRNQVLKSAEDAKN------------ 200

  Fly   376 QHQRKLLEAAQREPLLLSTKAAKAEYKQSSYNQPIHYPYVFDSQLLAKQHAGFIGGSRITLPDNA 440
               |||..|         ||..|             ||:||.........|....|.:.|||...
Yeast   201 ---RKLNPA---------TKIIK-------------YPHVFRKYEAGSTTAMAFAGQKFTLPVGT 240

  Fly   441 QRIDNKQWEEVKIPASEPPPLSVGNKR------VQIEELDDVGRLAFANCKELNRIQSVVFPVAY 499
            .|:.....||:.|||::    ...||.      ::|.:||...:..|. .:.||:|||:|:||||
Yeast   241 TRMSYNTHEEIIIPAAD----QASNKNYLYTKLLKISDLDHFCKTVFP-YETLNQIQSLVYPVAY 300

  Fly   500 HSNENMLVCAPTGAGKTNVAMLSIVHTIRCHLEQGVIN--------RDEFKIVYIAPMKALAAEM 556
            .:|||||:|||||||||::|:|:|::||:   :..|:|        .|:||::|:||:||||||:
Yeast   301 KTNENMLICAPTGAGKTDIALLTIINTIK---QFSVVNGENEIDIQYDDFKVIYVAPLKALAAEI 362

  Fly   557 VDNFSKRLKSLQIAVRELTGDIQLTKAEMAATQILVTTPEKWDVVTRKGSGDVALISLVELLIID 621
            ||.|||:|....|.|||||||:||||||:.|||::|||||||||||||.:||..|:|.|:|||||
Yeast   363 VDKFSKKLAPFNIQVRELTGDMQLTKAEILATQVIVTTPEKWDVVTRKANGDNDLVSKVKLLIID 427

  Fly   622 EVHLLHGERGPVVEALVARTLRLVESSQSMIRIVGLSATLPNYIDVAHFLRVNPMKGLFYFDSRF 686
            ||||||.:||.|:|.|||||||.||||||||||:||||||||::|||.||.||...|:||||..|
Yeast   428 EVHLLHEDRGSVIETLVARTLRQVESSQSMIRIIGLSATLPNFMDVADFLGVNRQIGMFYFDQSF 492

  Fly   687 RPVPLDTNFVGIK-SVKQLQQIADMDQCCYQKCVEMVQEGHQIMVFVHARNATVRTANVIRELAQ 750
            ||.||:...:|.: .....|...::|:..|.|..||:|.|:|:|||||:|..||::|....:||:
Yeast   493 RPKPLEQQLLGCRGKAGSRQSKENIDKVAYDKLSEMIQRGYQVMVFVHSRKETVKSARNFIKLAE 557

  Fly   751 QNNTSALFLPKDSAAHGLATRSIQRSRNKQLVELFSCGLAMHHAGMLRADRQMVEKYFVEGHISV 815
            .|:...||.| |.......:||:.::|:|.:.|:|..|..:|||||.|:||.:.||.|.:|.|.|
Yeast   558 SNHEVDLFAP-DPIEKDKYSRSLVKNRDKDMKEIFQFGFGIHHAGMARSDRNLTEKMFKDGAIKV 621

  Fly   816 LVCTATLAWGVNLPAHAVIIRGTDIYDAKHGSFVDLGILDVLQIFGRAGRPQF-DKSGVGTIITS 879
            |.|||||||||||||..|||:||.:||:|.|.|:||||.||:|||||.|||.| ..:|.|.:.||
Yeast   622 LCCTATLAWGVNLPADCVIIKGTQVYDSKKGGFIDLGISDVIQIFGRGGRPGFGSANGTGILCTS 686

  Fly   880 YDKLNHYLSLLTNQFPIESNFVNCLADNLNAEIGLGTITNVDEAIEWLSYTYLFVRMRINPHVYG 944
            .|:|:||:||:|.|.||||.|.:.|.|||||||.||::||||||||||.|||:|||||.||..||
Yeast   687 NDRLDHYVSLITQQHPIESRFGSKLVDNLNAEISLGSVTNVDEAIEWLGYTYMFVRMRKNPFTYG 751

  Fly   945 IEYSELEKDPTLEARRRALIMSAAMSLDKARMMRFNQRTMDMNITDLGRTASYFYIKYDTVETFN 1009
            |::.|:..||.|..|||.:|:.||..|...:|:.|::.:|.....||||.:|.||:..::||.||
Yeast   752 IDWEEIANDPQLYERRRKMIVVAARRLHALQMIVFDEVSMHFIAKDLGRVSSDFYLLNESVEIFN 816

  Fly  1010 ELMKPFMTQAEILAMISQAQEFQQLKVRDDEMEELDEL--KNAYCKIKPYGGS--ENVHGKVNIL 1070
            ::..|..|:|::|:|||.:.||..:|.|::|.:||..|  ::..|:|    ||  :...||.|:|
Yeast   817 QMCDPRATEADVLSMISMSSEFDGIKFREEESKELKRLSDESVECQI----GSQLDTPQGKANVL 877

  Fly  1071 IQTYLSNGYVKSFSLSSDMSYITTNIGRISRALFSIVLRQNNAVLSGNMLQLCKMFERRQWDFDC 1135
            :|.|:|...:...:||||.:|:..|..||.||||.|.:.:.....|..||.:||..|:|.|.||.
Yeast   878 LQAYISQTRIFDSALSSDSNYVAQNSVRICRALFLIGVNRRWGKFSNVMLNICKSIEKRLWAFDH 942

  Fly  1136 HLKQFPTINAETIDKLERRGLSVYRLRDMEHRELKEWLRSNTYADLVIRSAHELPLLEVEASLQP 1200
            .|.|| .:....|.::.....|:..|.::|..||.|.:.:......:.:.....|.:.:||.:.|
Yeast   943 PLCQF-DLPENIIRRIRDTKPSMEHLLELEADELGELVHNKKAGSRLYKILSRFPKINIEAEIFP 1006

  Fly  1201 ITRTVLRIKVDIWPSFTWNDRVHGKTCQSFWLWIEDPESNYIYHSELFQVTRKLVMSGQSQQLVM 1265
            ||..|:||.:.:.|.|.|:.|:|| ..|.||:::|:.:.:.|.|.|.|.:.|:.:  ....::..
Yeast  1007 ITTNVMRIHIALGPDFVWDSRIHG-DAQFFWVFVEESDKSQILHFEKFILNRRQL--NNQHEMDF 1068

  Fly  1266 TIPLKEPLPPQYYIRVSSDNWLGSTTCIPLSFQHLVLPEHHPPLTELLPLRPLPVSCLKNVVYES 1330
            .|||.:|||||..::|.||.|:|..:...:|||||:.|.:....|:||.|||||.|.|:|.:.||
Yeast  1069 MIPLSDPLPPQVVVKVVSDTWIGCESTHAISFQHLIRPFNETLQTKLLKLRPLPTSALQNPLIES 1133

  Fly  1331 LYKFTHFNPIQTQIFHCLYHTDNNVLLGAPTGSGKTIVAEIAIFRALNQNPKCKVVYIAPLKALV 1395
            :|.|.:|||:||..|:.||:|:.|..:|:|||||||||||:||:.|....|..|:|||||:||||
Yeast  1134 IYPFKYFNPMQTMTFYTLYNTNENAFVGSPTGSGKTIVAELAIWHAFKTFPGKKIVYIAPMKALV 1198

  Fly  1396 KERIADWEQRFQRSSLGLKVVELTGDVTPDIQAIRESQLIVTTPEKWDGISRSWQTREYVQHVSL 1460
            :||:.||.::....: |.||||||||..||.:.:.::.:::|||||:|||||:||||::||.|||
Yeast  1199 RERVDDWRKKITPVT-GDKVVELTGDSLPDPKDVHDATIVITTPEKFDGISRNWQTRKFVQDVSL 1262

  Fly  1461 IVIDEIHLLGEDRGPVIEVIVSRTNFISSHTGRAIRIVGLSTALANAQDLANWLGINKMGLYNFK 1525
            |::||||||..||||::|:||||.|:|||.|.:.:|::|:|||::||.|:|.|||:...|||||.
Yeast  1263 IIMDEIHLLASDRGPILEMIVSRMNYISSQTKQPVRLLGMSTAVSNAYDMAGWLGVKDHGLYNFP 1327

  Fly  1526 PSVRPVPLQVHINGFPGK-HYCPRMATMNRPTFQAIRTYSPCEPTIVFVSSRRQTRLTALDLITF 1589
            .|||||||:::|:|||.. .:||.|.|||:|.|.||:.:||.:|.::||:|||||||||||||..
Yeast  1328 SSVRPVPLKMYIDGFPDNLAFCPLMKTMNKPVFMAIKQHSPDKPALIFVASRRQTRLTALDLIHL 1392

  Fly  1590 VAGESNPKQFLHI-PEDEIELILQNIREQNLKFCLAFGIGLHHAGLQEQDRKCVEELFLNRKIQI 1653
            ...|.||::||:| .|:|::..|..:.:..||..|.||||||||||.::||....:||...||||
Yeast  1393 CGMEDNPRRFLNIDDEEELQYYLSQVTDDTLKLSLQFGIGLHHAGLVQKDRSISHQLFQKNKIQI 1457

  Fly  1654 LVATATLAWGVNLPAHLVVIKGTEYFDGKVKKYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHD 1718
            |:||:|||||||||||||:||||::||.|::.|.||.:||:||||||||||.:|..|.|:|...:
Yeast  1458 LIATSTLAWGVNLPAHLVIIKGTQFFDAKIEGYRDMDLTDILQMMGRAGRPAYDTTGTAIVYTKE 1522

  Fly  1719 EKKNFYKKFLYDPFPVESSLLGVLPEHINAEIVAGTVQSKQAALDYLTWTYFFRRLLRNPSYYQL 1783
            .||.|||.||...|||||||..||.:|:.|||.:|::.:||.|||:|:||:.|||...||:||.:
Yeast  1523 SKKMFYKHFLNVGFPVESSLHKVLDDHLGAEITSGSITNKQEALDFLSWTFLFRRAHHNPTYYGI 1587

  Fly  1784 Q-DIEPENVNNFMSNLVERVVYELSAAAC-LVERDGCLIPTFLGRISSYYYLSYRTMKHFLEDLQ 1846
            : |.....|:..:|:|::..:..|..:.| |:..|..:...||. ||||||:|:.|::..|:.:.
Yeast  1588 EDDTSTAGVSEHLSSLIDSTLENLRESQCVLLHGDDIVATPFLS-ISSYYYISHLTIRQLLKQIH 1651

  Fly  1847 PGMNTKKVLLAIADSYEFDQLPVRHNEDKHNEEMAEVSRFRPPSS--------SWDSSYTKTFLL 1903
            .....::||..::.:.|:::||||..|...||||::.||:...|:        .|| .:.|||||
Yeast  1652 DHATFQEVLRWLSLAVEYNELPVRGGEIIMNEEMSQQSRYSVESTFTDEFELPMWD-PHVKTFLL 1715

  Fly  1904 LQAHFARQSLPNSDYLTDTKSALDNATRVMQAMVDYTAERGWLSTTLVVQQLMQSVIQARWFDGS 1968
            ||||.:|..||.:||:.||.|.||.:.|::||.:|..:|.|:..|.|.:.::||.:.|..|::..
Yeast  1716 LQAHLSRVDLPIADYIQDTVSVLDQSLRILQAYIDVASELGYFHTVLTMIKMMQCIKQGYWYEDD 1780

  Fly  1969 EFLTLPGVNEDNLDAFLNIPHDDYDY-------LT-------LPVLKELCKQEYEVLAKPLRDAF 2019
            ....|||:....:        .||.:       :|       |..|:|:.:..|    |.|.:.|
Yeast  1781 PVSVLPGLQLRRI--------KDYTFSEQGFIEMTPQQKKKKLLTLEEIGRFGY----KKLLNVF 1833

  Fly  2020 --------EEHEIEKMY-KVIQDLPEIAIQIFVEGRHMENEYAKRPLSLSDDTRGEWMSLHANED 2075
                    |..:.:|.: .|.|.||      .:||...|.:                   ..|| 
Yeast  1834 DQLTFGMTESEDTKKRFVSVCQRLP------VLEGMKFEEQ-------------------ENNE- 1872

  Fly  2076 YVLIVNLQRLNVSGQRRGGGQSYTVHCPKYPKPKNEAWFLTLGSQANDELLAMKRV--------- 2131
               ::.....::|.:...|   :.|:|.|:||.:.|.||| :|.: .||||.:||.         
Yeast  1873 ---VLTFYSKHLSSKHNNG---FEVYCDKFPKIQKELWFL-IGHK-GDELLMIKRCQPKQMNKEV 1929

  Fly  2132 ----------SIRGQRCTNRISFQATPRLGRLQLTLYLMSDCLMGFDQQYDLQFEII 2178
                      .|||:                 :|...|::|.|   ..:||:..::|
Yeast  1930 IIHCDLFIPEEIRGE-----------------ELQFSLINDAL---GLRYDMVHKLI 1966

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obeNP_650472.2 BRR2 450..1254 CDD:224125 395/823 (48%)
DEAD 488..666 CDD:278688 123/185 (66%)
HELICc 790..866 CDD:197757 50/75 (67%)
Sec63 989..1296 CDD:280962 107/310 (35%)
DEXDc 1332..1532 CDD:214692 114/199 (57%)
DEAD 1338..1510 CDD:278688 97/171 (57%)
HELICc 1605..1704 CDD:197757 59/98 (60%)
SEC63 1818..2176 CDD:214744 110/407 (27%)
SLH1NP_011787.4 BRR2 250..1059 CDD:224125 395/823 (48%)
BRR2 1136..1809 CDD:224125 329/683 (48%)
DEXHc_ASCC3_2 1139..1327 CDD:350780 107/188 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345626
Domainoid 1 1.000 240 1.000 Domainoid score I374
eggNOG 1 0.900 - - E1_COG1204
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4973
Inparanoid 1 1.050 1382 1.000 Inparanoid score I12
Isobase 1 0.950 - 0 Normalized mean entropy S1342
OMA 1 1.010 - - QHG54133
OrthoFinder 1 1.000 - - FOG0001085
OrthoInspector 1 1.000 - - oto98942
orthoMCL 1 0.900 - - OOG6_100305
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R777
SonicParanoid 1 1.000 - - X3726
TreeFam 1 0.960 - -
1514.640

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