DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obe and Mtr4

DIOPT Version :9

Sequence 1:NP_650472.2 Gene:obe / 41891 FlyBaseID:FBgn0038344 Length:2183 Species:Drosophila melanogaster
Sequence 2:NP_524929.1 Gene:Mtr4 / 48782 FlyBaseID:FBgn0001986 Length:1055 Species:Drosophila melanogaster


Alignment Length:876 Identity:216/876 - (24%)
Similarity:356/876 - (40%) Gaps:239/876 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1294 PLSFQHLVLPEHHPPLTELLPLRPLPVSCLKNVVYESLYKFTHFNPIQTQIFHCLYHTDN--NVL 1356
            |.|..|.|..  ||. .|.:||:|.      :.|....|.|. .:|.|.|...|:   ||  :||
  Fly   119 PKSCTHEVAA--HPD-QEYIPLKPF------SGVPAKEYPFV-LDPFQRQAILCI---DNSQSVL 170

  Fly  1357 LGAPTGSGKTIVAEIAIFRALNQNPKCKVVYIAPLKALVKERIADWEQRFQRSSLGLKVVELTGD 1421
            :.|.|.:|||:|||.||.::|  ..|.:|:|..|:|||..::..::...|:  .:||    :|||
  Fly   171 VSAHTSAGKTVVAEYAIAKSL--AAKQRVIYTTPIKALSNQKFREFTDEFK--DVGL----VTGD 227

  Fly  1422 VTPDIQAIRESQLIVTTPEKWDGISRS--WQTREYVQHVSLIVIDEIHLL-GEDRGPVIE--VIV 1481
            ||.:..|   |.||:||.     |.|:  ::..|.::.|..:|.||||.: .::||.|.|  :|:
  Fly   228 VTINPSA---SCLIMTTE-----ILRNMLYRGSEIMREVGWVVFDEIHYMRDKERGVVWEETLIL 284

  Fly  1482 SRTNFISSHTGRAIRIVGLSTALANAQDLANWL-GINKMGLYNFKPSVRPVPLQVHINGFP---- 1541
            ...|         :|.|.||..:.||:..|.|: .::|...:......||.|||.:|  ||    
  Fly   285 LPDN---------VRYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYI--FPAGGD 338

  Fly  1542 GKH-------------YCPRMATM------------------------NRPTFQAI-----RTYS 1564
            |.|             :...||.:                        ....|:.:     |.::
  Fly   339 GIHLIVDEKGQFKEDNFTTAMAVLANAGEAGKGDQKGRHGGIKGTNAGQTNIFKIVKMIMERNFA 403

  Fly  1565 PCEPTIVFVSSRRQTRLTALDLITFVAGESNPKQFLHIPEDEI-----ELILQNIRE----QNLK 1620
               |.|:|..|::...:.|:.:........:.|:.:    ||:     :::.:..|.    :|:.
  Fly   404 ---PVIIFSFSKKDCEIYAMQMAKLDFNTPDEKKLV----DEVFNNAMDVLTEEDRRLPQVENVL 461

  Fly  1621 FCLAFGIGLHHAGLQEQDRKCVEELFLNRKIQILVATATLAWGVNLPAHLVVIKGTEYFDGKVKK 1685
            ..|..|||:||.||....::.:|.||....|:.|.||.|.|.|:|:||..|:......||||..:
  Fly   462 PLLRRGIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKKFR 526

  Fly  1686 YVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDEKKNFYKKFLYDPFPVESSLLGVLPEHINAEI 1750
            ::..  .:.:||.|||||...|::|: |:|:.|||                    |.|. :..:|
  Fly   527 WISS--GEYIQMAGRAGRRGLDDKGI-VILMIDEK--------------------VSPA-VGRDI 567

  Fly  1751 VAGTVQSKQAALDYLTWTYFFRRLLR----NP------SYYQLQDIEPENVNNFMSNLVERVVYE 1805
            |.|......:|. :||:.... .|||    ||      |:||.|:   :.....:.:.||:...|
  Fly   568 VQGKADPINSAF-HLTYNMVL-NLLRVEEINPEYMLERSFYQFQN---QAALPGLHDQVEQKTLE 627

  Fly  1806 LSAAACLVERDGCLIPTFLGRISSYYYLSYRTMKH-------------FLEDLQPGMNTKKVLLA 1857
            |:......|.:          |:||:::..:..:|             .|..||||    :::..
  Fly   628 LNKLTIKDEHN----------IASYHHIRSQLDQHGKQFRQWITKPQYLLPFLQPG----RLVKV 678

  Fly  1858 IADSYEFDQLPV----RHNEDKHNEEMAEVSRFRPPSSSWDSSYTKTFLLLQAHFARQSLPNSDY 1918
            .|.|.|:|...|    :.::.:.|...||      ||.:.|       :||  |.:..:....  
  Fly   679 AAGSQEYDWGIVLNFKKQDQSRKNPLKAE------PSVTID-------VLL--HVSEAAAKTG-- 726

  Fly  1919 LTDTKSALDNATRVMQAMVDYTAERGWLSTTLVVQQLMQSVIQARWFDGSEFLTLPGVNEDNLDA 1983
              ||:....|             |||.:....|...|:..:...|.:..::..     :.||..|
  Fly   727 --DTEPCKPN-------------ERGCMEVVPVAHTLITQISSIRVYFPNDLR-----SADNRRA 771

  Fly  1984 FLNIPHDDYDYLTL--PVLKELCKQEYEVLAKPLRD----------AFEEH------EIEKMYKV 2030
            .|....:......|  |||..:  .:..:..:..||          ..|||      |:|::::.
  Fly   772 VLKTIQEAKKRFPLGPPVLNPI--DDMNIKDREFRDIVNTISQFEKRLEEHPLHKSPELERIHRR 834

  Fly  2031 IQDLPEIAIQIFVEGRHMENEYAKRPLSLSD 2061
            .||  ::.:|..::....|.:.|:..|.:.:
  Fly   835 YQD--KVTLQKQLQDLKAELKAARSLLQMDE 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obeNP_650472.2 BRR2 450..1254 CDD:224125
DEAD 488..666 CDD:278688
HELICc 790..866 CDD:197757
Sec63 989..1296 CDD:280962 1/1 (100%)
DEXDc 1332..1532 CDD:214692 68/207 (33%)
DEAD 1338..1510 CDD:278688 61/178 (34%)
HELICc 1605..1704 CDD:197757 36/107 (34%)
SEC63 1818..2176 CDD:214744 53/279 (19%)
Mtr4NP_524929.1 Dob10 91..1055 CDD:226947 216/876 (25%)
DEAD 154..299 CDD:278688 59/172 (34%)
HELICc 390..554 CDD:238034 48/173 (28%)
rRNA_proc-arch 600..853 CDD:289976 60/310 (19%)
DSHCT 881..1048 CDD:285374
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466319
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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