DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obe and Sec63

DIOPT Version :9

Sequence 1:NP_650472.2 Gene:obe / 41891 FlyBaseID:FBgn0038344 Length:2183 Species:Drosophila melanogaster
Sequence 2:NP_648111.1 Gene:Sec63 / 38819 FlyBaseID:FBgn0035771 Length:753 Species:Drosophila melanogaster


Alignment Length:668 Identity:130/668 - (19%)
Similarity:212/668 - (31%) Gaps:270/668 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly  1724 YKKFLYDPFPVESSLLGVLPEHINAEIVAGTVQSKQAALDYLTWTYFFRRLLRNPSYYQLQ---- 1784
            |:...:|||    .:|.|.|....|||       |:|                   ||:|.    
  Fly    99 YEMASFDPF----EILNVPPTSSQAEI-------KKA-------------------YYRLSKVLH 133

  Fly  1785 -DIEPENVNNFM---------SNLVERVVYE--------------LSAAACLVERDGCL------ 1819
             |.|..:..:||         ::.|.:..||              ::..:.:||::..:      
  Fly   134 PDKETGDEKSFMMLSKAYQALTDDVAKENYEKYGNPDGPGAMSFGIALPSWIVEKENSVWVLGLY 198

  Fly  1820 -------IPTFLG-------RISS----------YYYLSYRTMKHFLEDLQPGMNTKKVLLAIAD 1860
                   :|:.:|       |.|.          |:|..::|         |.|..|:.|:.:|.
  Fly   199 GLVFMVAMPSAVGVWWYRSIRFSGDKVLLDTTQMYFYFIHKT---------PHMLLKRALMVLAA 254

  Fly  1861 SYEFDQLPVRHN-----EDKHNEEMAEVSRFRPPSSSWDSSY-------TKTFLLLQAHFARQSL 1913
            |.|||:   |||     ....|:|:..:.|..|..:.....:       .|...:|.||.:|..|
  Fly   255 SLEFDK---RHNSQVQERQSDNDEVPALIRQLPNLNEKCKEHPLCRMYSIKARAILHAHLSRMPL 316

  Fly  1914 PNSDYLTDTKSALDNATRVMQAMVD---------YTAERGWLSTTLVVQQLMQ---SVIQARWFD 1966
            .......|.:..:.....::|.||.         |......|.:...::..|:   .:||..|..
  Fly   317 NPETLERDRQFVVKKCPYLVQEMVSCVHQLVMMAYARRVPRLPSIETIENCMKMSPMIIQGLWEF 381

  Fly  1967 GSEFLTLPGVNED------------NLDAFLNIPHDDYDYLTLPVLKELCKQEYE----VLAK-P 2014
            .|..|.||.:.||            ||..|..:..::    :..:||.|...|||    ||.| |
  Fly   382 KSPLLQLPHLTEDHLYFMNKKRHVKNLQQFAQLKPEE----SRQLLKNLSDFEYENTMKVLGKMP 442

  Fly  2015 LRDAFEEHEI--EKMYKVIQDLPEIAIQIFVEGRHME------------------NEYA------ 2053
            |.|.....|:  ::...|:.....:.:.:.:|.:.|:                  ||.|      
  Fly   443 LIDFSIRCEVIDDENTNVVTAGAIVTVTVTLERKDMKTLFGDTKAPEKQGIKDETNEEAAGDEDE 507

  Fly  2054 -------------------------KRPL------------------------------------ 2057
                                     |:|.                                    
  Fly   508 AAAAAPVKKASAWAKPRKGGKGKGGKKPAQNQKNQKKVPAKAATTATITASEDQAAAGNSDAESE 572

  Fly  2058 ---------------------------SLSDDTRGEWMSLHANEDYVLIVNLQRLNVSGQRRGGG 2095
                                       ||.||...||..|.|..:       :|..:.|:.|   
  Fly   573 AGNADGSDVESAAGSGSEDEEKGKNNSSLDDDDDEEWERLQAKLN-------KRERLEGKSR--- 627

  Fly  2096 QSYTVHCPKYPKPKNEAWFLTLGSQANDELL-AMKRVSIRGQRCTNRISFQATPRLGRLQLTLYL 2159
            .|:|||||.:|:.|.|.|:..:..:.:..|| |...|:...::...::.|.|....|....|:.|
  Fly   628 LSHTVHCPYFPEEKQEYWWTYICDRKSRTLLTAPYHVTNLVEKEEIQLKFTAPRWPGVYTFTVCL 692

  Fly  2160 MSDCLMGFDQQYDLQFEI 2177
            .||..:|.|||.:|:.::
  Fly   693 RSDSYLGMDQQQELKLDV 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obeNP_650472.2 BRR2 450..1254 CDD:224125
DEAD 488..666 CDD:278688
HELICc 790..866 CDD:197757
Sec63 989..1296 CDD:280962
DEXDc 1332..1532 CDD:214692
DEAD 1338..1510 CDD:278688
HELICc 1605..1704 CDD:197757
SEC63 1818..2176 CDD:214744 106/543 (20%)
Sec63NP_648111.1 DnaJ 105..164 CDD:278647 19/88 (22%)
SEC63 211..709 CDD:214744 105/523 (20%)
SEEEED 559..>626 CDD:291463 10/73 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24075
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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