DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obe and Sec63

DIOPT Version :10

Sequence 1:NP_650472.2 Gene:obe / 41891 FlyBaseID:FBgn0038344 Length:2183 Species:Drosophila melanogaster
Sequence 2:NP_648111.1 Gene:Sec63 / 38819 FlyBaseID:FBgn0035771 Length:753 Species:Drosophila melanogaster


Alignment Length:668 Identity:130/668 - (19%)
Similarity:212/668 - (31%) Gaps:270/668 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly  1724 YKKFLYDPFPVESSLLGVLPEHINAEIVAGTVQSKQAALDYLTWTYFFRRLLRNPSYYQLQ---- 1784
            |:...:|||    .:|.|.|....|||       |:|                   ||:|.    
  Fly    99 YEMASFDPF----EILNVPPTSSQAEI-------KKA-------------------YYRLSKVLH 133

  Fly  1785 -DIEPENVNNFM---------SNLVERVVYE--------------LSAAACLVERDGCL------ 1819
             |.|..:..:||         ::.|.:..||              ::..:.:||::..:      
  Fly   134 PDKETGDEKSFMMLSKAYQALTDDVAKENYEKYGNPDGPGAMSFGIALPSWIVEKENSVWVLGLY 198

  Fly  1820 -------IPTFLG-------RISS----------YYYLSYRTMKHFLEDLQPGMNTKKVLLAIAD 1860
                   :|:.:|       |.|.          |:|..::|         |.|..|:.|:.:|.
  Fly   199 GLVFMVAMPSAVGVWWYRSIRFSGDKVLLDTTQMYFYFIHKT---------PHMLLKRALMVLAA 254

  Fly  1861 SYEFDQLPVRHN-----EDKHNEEMAEVSRFRPPSSSWDSSY-------TKTFLLLQAHFARQSL 1913
            |.|||:   |||     ....|:|:..:.|..|..:.....:       .|...:|.||.:|..|
  Fly   255 SLEFDK---RHNSQVQERQSDNDEVPALIRQLPNLNEKCKEHPLCRMYSIKARAILHAHLSRMPL 316

  Fly  1914 PNSDYLTDTKSALDNATRVMQAMVD---------YTAERGWLSTTLVVQQLMQ---SVIQARWFD 1966
            .......|.:..:.....::|.||.         |......|.:...::..|:   .:||..|..
  Fly   317 NPETLERDRQFVVKKCPYLVQEMVSCVHQLVMMAYARRVPRLPSIETIENCMKMSPMIIQGLWEF 381

  Fly  1967 GSEFLTLPGVNED------------NLDAFLNIPHDDYDYLTLPVLKELCKQEYE----VLAK-P 2014
            .|..|.||.:.||            ||..|..:..::    :..:||.|...|||    ||.| |
  Fly   382 KSPLLQLPHLTEDHLYFMNKKRHVKNLQQFAQLKPEE----SRQLLKNLSDFEYENTMKVLGKMP 442

  Fly  2015 LRDAFEEHEI--EKMYKVIQDLPEIAIQIFVEGRHME------------------NEYA------ 2053
            |.|.....|:  ::...|:.....:.:.:.:|.:.|:                  ||.|      
  Fly   443 LIDFSIRCEVIDDENTNVVTAGAIVTVTVTLERKDMKTLFGDTKAPEKQGIKDETNEEAAGDEDE 507

  Fly  2054 -------------------------KRPL------------------------------------ 2057
                                     |:|.                                    
  Fly   508 AAAAAPVKKASAWAKPRKGGKGKGGKKPAQNQKNQKKVPAKAATTATITASEDQAAAGNSDAESE 572

  Fly  2058 ---------------------------SLSDDTRGEWMSLHANEDYVLIVNLQRLNVSGQRRGGG 2095
                                       ||.||...||..|.|..:       :|..:.|:.|   
  Fly   573 AGNADGSDVESAAGSGSEDEEKGKNNSSLDDDDDEEWERLQAKLN-------KRERLEGKSR--- 627

  Fly  2096 QSYTVHCPKYPKPKNEAWFLTLGSQANDELL-AMKRVSIRGQRCTNRISFQATPRLGRLQLTLYL 2159
            .|:|||||.:|:.|.|.|:..:..:.:..|| |...|:...::...::.|.|....|....|:.|
  Fly   628 LSHTVHCPYFPEEKQEYWWTYICDRKSRTLLTAPYHVTNLVEKEEIQLKFTAPRWPGVYTFTVCL 692

  Fly  2160 MSDCLMGFDQQYDLQFEI 2177
            .||..:|.|||.:|:.::
  Fly   693 RSDSYLGMDQQQELKLDV 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obeNP_650472.2 Helicase_PWI <247..>284 CDD:436309
BRR2 485..1025 CDD:440817
DEXHc_ASCC3_1 486..683 CDD:350778
SEC63 985..1298 CDD:214744
BRR2 1334..1859 CDD:440817 35/192 (18%)
DEXHc_ASCC3_2 1336..1525 CDD:350780
SEC63 1818..2176 CDD:214744 106/543 (20%)
Sec63NP_648111.1 DnaJ 105..164 CDD:395170 19/88 (22%)
SEC63 211..709 CDD:214744 105/523 (20%)
Blue background indicates that the domain is not in the aligned region.

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