DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obe and HFM1

DIOPT Version :10

Sequence 1:NP_650472.2 Gene:obe / 41891 FlyBaseID:FBgn0038344 Length:2183 Species:Drosophila melanogaster
Sequence 2:NP_001017975.5 Gene:HFM1 / 164045 HGNCID:20193 Length:1435 Species:Homo sapiens


Alignment Length:1204 Identity:330/1204 - (27%)
Similarity:519/1204 - (43%) Gaps:288/1204 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   998 FYIKYDTVETFNELMKP---FMTQAEILAMISQAQEFQQLKVRDDEMEELDELKNAYCKIKPYGG 1059
            |:.|.|.||...:..|.   |:..|.:::.|...||.:         |||:..|....:.:|   
Human    15 FFEKPDEVENHPDNEKSLDWFLPPAPLISEIPDTQELE---------EELESHKLLGQEKRP--- 67

  Fly  1060 SENVHGKVNILIQTYLSNGYVKSFSLSSDMSYITTNIGRISRALFSIVLRQNNAVLSGNMLQLCK 1124
                                          ..:|:|            |:..|.  ..|.:.|.:
Human    68 ------------------------------KMLTSN------------LKITNE--DTNYISLTQ 88

  Fly  1125 MFERRQWDFDCHLKQFPTINAETIDKLERRGLSVYRLRDMEHRELKEWLRSNTYADLVIRSAHEL 1189
            .|:          ..||:      ||.|:..|:   |..:.:.:|.......|||....:: |..
Human    89 KFQ----------FAFPS------DKYEQDDLN---LEGVGNNDLSHIAGKLTYASQKYKN-HIG 133

  Fly  1190 PLLEVEASLQPITR------------TVLRIKVDIWPSFTWNDRVHGKTCQSFWLWIEDPESNYI 1242
            ..:..|.|:...|:            :|.|.::     |..:|.:||..      :..|.|.:  
Human   134 TEIAPEKSVPDDTKLVNFAEDKGESTSVFRKRL-----FKISDNIHGSA------YSNDNELD-- 185

  Fly  1243 YHSELFQVTRKLVMSGQSQQLVMTIPLKEPLPPQYYIRVSSDNWLGSTTCI-------PLSFQHL 1300
            .|....::.:..:..|:|:....:   |:..  ||...|.:.|...|.:.|       | ||...
Human   186 SHIGSVKIVQTEMNKGKSRNYSNS---KQKF--QYSANVFTANNAFSASEIGEGMFKAP-SFSVA 244

  Fly  1301 VLPEHHPPLTE-----LLPLRPLPVSCLKNVVYESLYK-FTHFNPIQTQIFHCLYHTDNNVLLGA 1359
            ..|.....:||     |..:..:|..      :.|::| |.:||.||::.|..|.:||.|.::.|
Human   245 FQPHDIQEVTENGLGSLKAVTEIPAK------FRSIFKEFPYFNYIQSKAFDDLLYTDRNFVICA 303

  Fly  1360 PTGSGKTIVAEIAIFRALNQNP----KCKVVYIAPLKALVKERIADWEQRFQRSSLGLKVVELTG 1420
            |||||||:|.|:||.|.|.:.|    ..|:||:||:|||..:|..||:::|  ..:||...||||
Human   304 PTGSGKTVVFELAITRLLMEVPLPWLNIKIVYMAPIKALCSQRFDDWKEKF--GPIGLNCKELTG 366

  Fly  1421 D-VTPDIQAIRESQLIVTTPEKWDGISRSWQTREYVQHVSLIVIDEIHLL-GEDRGPVIEVIVSR 1483
            | |..|:..|:.:.:|:|||||||.::|.|:....||.|.|.:|||:|:: .|:|||.:||:|||
Human   367 DTVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHIVKDENRGPTLEVVVSR 431

  Fly  1484 TNFISS------HTGRAI--RIVGLSTALANAQDLANWLGINKMGLYNFKPSV--------RPVP 1532
            ...:.|      :|..||  |.|.:|..:.||:|:|.||...:      :|:|        |||.
Human   432 MKTVQSVSQTLKNTSTAIPMRFVAVSATIPNAEDIAEWLSDGE------RPAVCLKMDESHRPVK 490

  Fly  1533 LQVHINGFPGKHYCPRM-------ATMNRPTFQAIRTYSPCEPTIVFVSSRRQTRLTALDLITFV 1590
            ||..:.|||    |...       .|:|......|:.||..:||:||.::|:..:..|..|:   
Human   491 LQKVVLGFP----CSSNQTEFKFDLTLNYKIASVIQMYSDQKPTLVFCATRKGVQQAASVLV--- 548

  Fly  1591 AGESNPKQFLHIPEDE-IELILQNIREQNLKFCLAFGIGLHHAGLQEQDRKCVEELFLNRKIQIL 1654
               .:.|..:.:.:.: ::....::|:..|:..|..|...||||::..|||.||..|....:.:|
Human   549 ---KDAKFIMTVEQKQRLQKYAYSVRDSKLRDILKDGAAYHHAGMELSDRKVVEGAFTVGDLPVL 610

  Fly  1655 VATATLAWGVNLPAHLVVIKGT-EYFDGKVKKYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHD 1718
            ..|:|||.||||||||||||.| .|..|..::|.:   ||:|||:|||||||||....||::...
Human   611 FTTSTLAMGVNLPAHLVVIKSTMHYAGGLFEEYSE---TDILQMIGRAGRPQFDTTATAVIMTRL 672

  Fly  1719 EKKNFYKKFLYDPFPVESSLLGVLPEHINAEIVAGTVQSKQAALDYLTWTYFFRRLLRNPSYY-- 1781
            ..::.|.:.|.....|||||...|.||:|||||..|:.....|::::..|..:.|.|:|||:|  
Human   673 STRDKYIQMLACRDTVESSLHRHLIEHLNAEIVLHTITDVNIAVEWIRSTLLYIRALKNPSHYGF 737

  Fly  1782 -----------QLQDIEPENVNNFMS----NLVERVVYELSAAACLVERDGCLIPTFLGRISSYY 1831
                       :||::..:|:|:..|    .:.|.|.::               ||..||:.::|
Human   738 ASGLNKDGIEAKLQELCLKNLNDLSSLDLIKMDEGVNFK---------------PTEAGRLMAWY 787

  Fly  1832 YLSYRTMKHF--------LEDLQPGMNTKKVLLAIADSYEFDQLPVRHNEDKH----NEEMAEVS 1884
            |:::.|:|.|        |.||         :..||...||..:.:|.||.|.    |::...::
Human   788 YITFETVKKFYTISGKETLSDL---------VTLIAGCKEFLDIQLRINEKKTLNTLNKDPNRIT 843

  Fly  1885 RFRPPSSSWDSSYTKTFLLLQAHFARQSLPNSDY-LT-DTKSALDNATRVMQAMVDYTAERGWLS 1947
            ...|......:...|...|:||...  .:|..|: || ||.....:.:|:.:          |||
Human   844 IRFPMEGRIKTREMKVNCLIQAQLG--CIPIQDFALTQDTAKIFRHGSRITR----------WLS 896

  Fly  1948 TTLVVQQ-----LMQSVIQARWF---------DGSEFLTLPGVNEDN------LDAFLNIPHDDY 1992
            ..:..|:     |:.|:|.|:.|         ..|:.|...|:...|      |.:|..|...|.
Human   897 DFVAAQEKKFAVLLNSLILAKCFRCKLWENSLHVSKQLEKIGITLSNAIVNAGLTSFKKIEETDA 961

  Fly  1993 DYLTL-----PVLKELCKQEYEVLAKPLRDAFEEHEIEKMYKVIQDLPEIAIQIFVEGRHMENEY 2052
            ..|.|     |......|:....|.|      .|.::|::.:......||.:.:.:  |:.|...
Human   962 RELELILNRHPPFGTQIKETVMYLPK------YELKVEQITRYSDTTAEILVTVIL--RNFEQLQ 1018

  Fly  2053 AKRPLS-------LSDDTRGEWMSLHANEDYVLI 2079
            .||..|       :..|...:.:.||...|.||:
Human  1019 TKRTASDSHYVTLIIGDADNQVVYLHKITDSVLL 1052

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obeNP_650472.2 Helicase_PWI <247..>284 CDD:436309
BRR2 485..1025 CDD:440817 8/29 (28%)
DEXHc_ASCC3_1 486..683 CDD:350778
SEC63 985..1298 CDD:214744 58/321 (18%)
BRR2 1334..1859 CDD:440817 205/580 (35%)
DEXHc_ASCC3_2 1336..1525 CDD:350780 86/202 (43%)
SEC63 1818..2176 CDD:214744 71/308 (23%)
HFM1NP_001017975.5 BRR2 264..798 CDD:440817 204/575 (35%)
DEXHc_HFM1 280..488 CDD:350781 88/215 (41%)
DEAH box 411..414 2/2 (100%)
Sec63 777..1090 CDD:460740 71/305 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1109..1139
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1295..1315
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.