Sequence 1: | NP_524368.5 | Gene: | Rh6 / 41889 | FlyBaseID: | FBgn0019940 | Length: | 369 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_112277.2 | Gene: | Opn1sw / 81644 | RGDID: | 621033 | Length: | 346 | Species: | Rattus norvegicus |
Alignment Length: | 339 | Identity: | 84/339 - (24%) |
---|---|---|---|
Similarity: | 161/339 - (47%) | Gaps: | 34/339 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 42 LEPMWFGIIGFVIAILGTMSLAG---NFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMM-MFTMFP 102
Fly 103 PVVLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMARKPLTATAAVLRL 167
Fly 168 MVVWTICGAWALMPLFGWNRYVPEGNMTACGTDYFAKDWWNRSYIIVYSLWV--YLTPLLTIIFS 230
Fly 231 YWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPYTIINY 295
Fly 296 AGIFESMHLSPLSTI-CGSVFAKANAVCNPIVYGLSHPKYKQVLREKMPCLACGK-----DDLTS 354
Fly 355 DSRTQATAEISESQ 368 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rh6 | NP_524368.5 | 7tmA_photoreceptors_insect | 48..338 | CDD:320207 | 75/296 (25%) |
TM helix 1 | 50..74 | CDD:320207 | 6/26 (23%) | ||
TM helix 2 | 83..105 | CDD:320207 | 6/22 (27%) | ||
TM helix 3 | 121..143 | CDD:320207 | 7/21 (33%) | ||
TM helix 4 | 165..181 | CDD:320207 | 3/15 (20%) | ||
TM helix 5 | 209..232 | CDD:320207 | 8/24 (33%) | ||
TM helix 6 | 273..295 | CDD:320207 | 2/21 (10%) | ||
TM helix 7 | 306..331 | CDD:320207 | 8/25 (32%) | ||
Opn1sw | NP_112277.2 | 7tmA_SWS1_opsin | 33..312 | CDD:320204 | 75/293 (26%) |
TM helix 1 | 35..59 | CDD:320204 | 6/23 (26%) | ||
TM helix 2 | 68..90 | CDD:320204 | 6/22 (27%) | ||
TM helix 3 | 106..128 | CDD:320204 | 7/21 (33%) | ||
TM helix 4 | 150..166 | CDD:320204 | 3/15 (20%) | ||
TM helix 5 | 196..219 | CDD:320204 | 6/22 (27%) | ||
TM helix 6 | 246..268 | CDD:320204 | 2/21 (10%) | ||
TM helix 7 | 280..305 | CDD:320204 | 8/24 (33%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 322..346 | 4/22 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X120 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |