DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh6 and opn7a

DIOPT Version :9

Sequence 1:NP_524368.5 Gene:Rh6 / 41889 FlyBaseID:FBgn0019940 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_001303877.1 Gene:opn7a / 570397 ZFINID:ZDB-GENE-140106-15 Length:455 Species:Danio rerio


Alignment Length:309 Identity:82/309 - (26%)
Similarity:147/309 - (47%) Gaps:33/309 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 IGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTWI 114
            :|.|.::.|..||.||.:::|:....|.|..|:..|:||||.||..|..:::|..|.:.....|:
Zfish    21 VGIVYSLFGVCSLCGNSMLLYVSYKKKHLLKPAEFFIVNLAISDLGMTLSLYPLAVTSSIAHRWL 85

  Fly   115 MGPFLCELYGMFGSLFGCVSIWSMTLIAYD---RYCVIVKGMARKPLTATAAVLRLMVVWTICGA 176
            .|..:|.:|...|.|||..|:.::|:::..   :.|..:.|   ...:.....:.::..|.....
Zfish    86 YGRTVCVIYAFCGVLFGICSLTTLTILSTVCCLKVCYPLHG---NRFSYEHGRMLIVCAWAYSLV 147

  Fly   177 WALMPLFGWNRYVPEGNMTACGTDYFAKDWWN-----RSYIIVYSLWVYLTPLLTIIFSYWHIMK 236
            :|..||..|.:|.||...|||..|:   .|.|     |||..|..:..||.|.:.||.||..|:.
Zfish   148 FACSPLAHWGQYGPEPYGTACCIDW---AWSNQNSVARSYTTVLFIACYLVPCVIIIISYTRILI 209

  Fly   237 AVAAHEKAMRE----QAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPYTIIN-YA 296
            .|....:|:.:    |.:..|:.::              :.|:::.....:|.||:||.::: :|
Zfish   210 TVRESRRAVEQHVSAQTRMGNIQTI--------------IVKLSVAVCIGFFTAWSPYALVSMWA 260

  Fly   297 GIFESMHLSPLSTICGSVFAKANAVCNPIVYGLSHPKYKQVLREKMPCL 345
            .......:.|::....::|||::.:.||::|.|..|.::.:|.:.|..|
Zfish   261 AFGHFDDIPPMAFAVPAMFAKSSTLYNPLIYLLLKPNFRHLLCKDMRSL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh6NP_524368.5 7tmA_photoreceptors_insect 48..338 CDD:320207 79/300 (26%)
TM helix 1 50..74 CDD:320207 8/23 (35%)
TM helix 2 83..105 CDD:320207 9/21 (43%)
TM helix 3 121..143 CDD:320207 7/21 (33%)
TM helix 4 165..181 CDD:320207 2/15 (13%)
TM helix 5 209..232 CDD:320207 10/22 (45%)
TM helix 6 273..295 CDD:320207 6/22 (27%)
TM helix 7 306..331 CDD:320207 8/24 (33%)
opn7aNP_001303877.1 7TM_GPCR_Srd 23..235 CDD:304638 62/231 (27%)
7tm_1 35..291 CDD:278431 71/275 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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