Protein Alignment Rh6 and opn7c

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: NP_001038457.1
• Gene: opn7c / 562695
• ZFINID: ZDB-GENE-060526-333
• Length: 404
• Species: Danio rerio
• Alignment Length: 318
• Identity: 81/318 - (25%)
• Similarity: 150/318 - (47%)
• Gaps: 35/318 - (11%)

  Fly    49 IIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTW 113
            ::|.:.::...:||.||.:::::....:....|:..|||||:.||..|..::||..:.:.....|
Zfish    21 LMGSLYSVFFVLSLLGNGMLLFVAYRKRSSLKPAEFFVVNLSVSDLGMTLSLFPLAIPSALAHRW 85

  Fly   114 IMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYC---VIVKGMARKPLTATAAVLRLMVVWTICG 175
            :.|...|..|.:.|.|||..|:.::|  |....|   |.......| .:::.|.:.::.||....
Zfish    86 LFGEITCLCYAVCGVLFGLCSLTNLT--ALSSVCCLKVCFPNYGNK-FSSSHACVMVIGVWCYAS 147

  Fly   176 AWALMPLFGWNRYVPEGNMTACGTDYF--AKDWWNRSYIIVYSLWVYLTPLLTIIFSYWHIMKAV 238
            .:|:.||..|..:.||...|||..:::  :.|....||||...::.|:.|...||.||..|:..|
Zfish   148 VFAVGPLVHWGSFGPEPYGTACCINWYTPSHDALAMSYIISLFIFCYVVPCTIIILSYTFILVTV 212

  Fly   239 AAHEKAMRE----QAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPYTII-NYAGI 298
            ...::|:::    |.|..|..:|              :.|:::.....:..||:||.|: .:|..
Zfish   213 RGSQQAVQQHVSPQTKVTNAHAL--------------IVKLSVAVCIGFLTAWSPYAIVAMWAAF 263

  Fly   299 FESMHLSPLSTICGSVFAKANAVCNPIVYGLSHPKYK-------QVLREKMPCLACGK 349
            ..:..:.|.:....::.||::.:.||:||.|..|.::       |:.|.:: ||:..|
Zfish   264 SANEQVPPTAFALAAIMAKSSTIYNPMVYLLFKPNFRKSLSQDTQMFRHRI-CLSHSK 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	77/305 (25%)
		TM helix 1	49..75	CDD:320207	5/25 (20%)
		TM helix 2	82..108	CDD:320207	10/25 (40%)
		TM helix 3	120..150	CDD:320207	11/32 (34%)
		TM helix 4	161..181	CDD:320207	4/19 (21%)
		TM helix 5	208..237	CDD:320207	11/28 (39%)
		TM helix 6	267..297	CDD:320207	6/30 (20%)
		TM helix 7	306..331	CDD:320207	8/24 (33%)
opn7c	NP_001038457.1	7tmA_Opsin5_neuropsin	20..303	CDD:320202	76/298 (26%)
		TM helix 1	21..47	CDD:320202	5/25 (20%)
		TM helix 2	54..81	CDD:320202	10/26 (38%)
		TM helix 3	92..122	CDD:320202	10/31 (32%)
		TM helix 4	135..153	CDD:320202	4/17 (24%)
		TM helix 5	182..212	CDD:320202	11/29 (38%)
		TM helix 6	231..261	CDD:320202	8/43 (19%)
		TM helix 7	271..296	CDD:320202	8/24 (33%)