Protein Alignment Rh6 and parapinopsin

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: NP_998830.1
• Gene: parapinopsin / 407755
• XenbaseID: XB-GENE-29098935
• Length: 348
• Species: Xenopus tropicalis
• Alignment Length: 368
• Identity: 88/368 - (23%)
• Similarity: 160/368 - (43%)
• Gaps: 44/368 - (11%)

  Fly     3 SLHPPSFAYMRDGRNLSLAESVPAEIMHMVDPYWYQWPPLEPMWFGIIGFVIAILGTMSLAGNFI 67
            :|.||..       |::..|..|.:::            :..:.:.|:..::|:....:|..|..
 Frog     5 ALLPPMM-------NVTNEEMHPGKVL------------MPRIGYTILALIMAVFCAAALFLNVT 50

  Fly    68 VMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTWIMGPFLCELYGMFGSLFGC 132
            |:.:....:.||.|.|..:||||.:|..:........|.....|.:.:|...|.:.|...:.||.
 Frog    51 VIVVTFKYRQLRHPINYSLVNLAIADLGVTVLGGALTVETNAVGYFNLGRVGCVIEGFAVAFFGI 115

  Fly   133 VSIWSMTLIAYDRYCVIVKGMARKPLTATAAVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTAC 197
            .::.::.:||.||..|:.|.|.....|...|:..:...|.....|...|||||..|..||.||:|
 Frog   116 AALCTIAVIALDRVFVVCKPMGTLTFTPKQALAGIAASWIWSLIWNTPPLFGWGSYELEGVMTSC 180

  Fly   198 GTDYFAKDWWNRSYIIVYSLWVYLTPLLTIIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEA 262
            ..::::.|..|.|||:.|..:.:..|.|.|:.||.::|..:        .|..|:.||     |.
 Frog   181 APNWYSADPVNMSYIVCYFSFCFAIPFLIIVGSYGYLMWTL--------RQVAKLGVA-----EG 232

  Fly   263 DKSKAIEIKLAKVALTTISLWFFAWTPY-----TIINYAGIFESMHLSPLSTICGSVFAKANAVC 322
            ..:...|::::::.:..|..:...|.||     |::...|    ||:.|:.........|.:.|.
 Frog   233 GTTSKAEVQVSRMVIVMILAFLVCWLPYAAFAMTVVANPG----MHIDPIIATVPMYLTKTSTVY 293

  Fly   323 NPIVYGLSHPKYKQVLREKMPCLACGKDDLTSDSRTQATAEIS 365
            |||:|...:.::::.:   :|.|.||::...::..:.....||
 Frog   294 NPIIYIFMNKQFQECV---IPFLFCGRNPWAAEKSSSMETSIS 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	76/294 (26%)
		TM helix 1	49..75	CDD:320207	5/25 (20%)
		TM helix 2	82..108	CDD:320207	7/25 (28%)
		TM helix 3	120..150	CDD:320207	9/29 (31%)
		TM helix 4	161..181	CDD:320207	3/19 (16%)
		TM helix 5	208..237	CDD:320207	11/28 (39%)
		TM helix 6	267..297	CDD:320207	6/34 (18%)
		TM helix 7	306..331	CDD:320207	7/24 (29%)
parapinopsin	NP_998830.1	7tmA_Parapinopsin	31..309	CDD:320203	76/294 (26%)
		TM helix 1	32..58	CDD:320203	5/25 (20%)
		TM helix 2	65..92	CDD:320203	7/26 (27%)
		TM helix 3	103..133	CDD:320203	9/29 (31%)
		TM helix 4	144..164	CDD:320203	3/19 (16%)
		TM helix 5	191..221	CDD:320203	11/29 (38%)
		TM helix 6	237..267	CDD:320203	5/29 (17%)
		TM helix 7	277..302	CDD:320203	7/24 (29%)