Protein Alignment Rh6 and opn1mw3

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: NP_878312.1
• Gene: opn1mw3 / 360152
• ZFINID: ZDB-GENE-030728-6
• Length: 349
• Species: Danio rerio
• Alignment Length: 367
• Identity: 95/367 - (25%)
• Similarity: 177/367 - (48%)
• Gaps: 40/367 - (10%)

  Fly    14 DGRNLSLAESVPAEIMHMVDPYWY-QWPPLEPMWFGIIGFVIAILGTMSLAGNFIVMYIFTSSKG 77
            :|.|..:..|....::.  .||.| |:...||..|.::...:..|.......|.:.:.:....|.
Zfish     5 EGNNFYIPMSNRTGLVR--SPYEYPQYYLAEPWQFKLLAVYMFFLMCFGFPINGLTLVVTAQHKK 67

  Fly    78 LRTPSNMFVVNLAFSDFMMM---FTMFPPVVLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMT 139
            ||.|.|..:||||.:..:|:   ||:.....:||::   ::||..|.:.|...:|.|.:|:||:.
Zfish    68 LRQPLNFILVNLAVAGTIMVCFGFTVTFYTAINGYF---VLGPTGCAIEGFMATLGGQISLWSLV 129

  Fly   140 LIAYDRYCVIVKGMARKPLTATAAVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTACGTDYFA- 203
            ::|.:||.|:.|.|.....::..|...:...|.:..:.|..||.||:||:|||...:||.||:.
Zfish   130 VLAIERYIVVCKPMGSFKFSSNHAFAGIGFTWIMALSCAAPPLVGWSRYIPEGMQCSCGPDYYTL 194

  Fly   204 -KDWWNRSYIIVYSLWVYLTPLLTIIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKA 267
             .|:.|.||::......::.|:.||.|:|..::..|.|              |:.:..|::.::.
Zfish   195 NPDYNNESYVLYMFCCHFIFPVTTIFFTYGRLVCTVKA--------------AAAQQQESESTQK 245

  Fly   268 IEIKLAKVALTTISLWFFAWTPYTII------NYAGIFESMHLSPLSTICGSVFAKANAVCNPIV 326
            .|.::.::.:..:..:..|||||..:      |....|.:..::     ..:.|:|::::.|||:
Zfish   246 AEREVTRMVILMVLGFLVAWTPYASVAAWIFFNRGAAFSAQFMA-----VPAFFSKSSSIFNPII 305

  Fly   327 YGLSHPKYKQVLREKMPCLACGKDDLTSD-SRTQATAEISES 367
            |.|.:.:::..:   :..|.|||:.|..| |.|.:|::...|
Zfish   306 YVLLNKQFRNCM---LTTLFCGKNPLGDDESSTVSTSKTEVS 344

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	75/300 (25%)
		TM helix 1	49..75	CDD:320207	2/25 (8%)
		TM helix 2	82..108	CDD:320207	8/28 (29%)
		TM helix 3	120..150	CDD:320207	11/29 (38%)
		TM helix 4	161..181	CDD:320207	3/19 (16%)
		TM helix 5	208..237	CDD:320207	8/28 (29%)
		TM helix 6	267..297	CDD:320207	7/35 (20%)
		TM helix 7	306..331	CDD:320207	7/24 (29%)
opn1mw3	NP_878312.1	Rhodopsin_N	3..37	CDD:313611	9/33 (27%)
		7tm_GPCRs	39..317	CDD:475119	75/299 (25%)
		TM helix 1	40..64	CDD:410628	2/23 (9%)
		TM helix 2	73..95	CDD:410628	8/21 (38%)
		TM helix 3	111..133	CDD:410628	6/21 (29%)
		TM helix 4	155..171	CDD:410628	2/15 (13%)
		TM helix 5	201..224	CDD:410628	6/22 (27%)
		TM helix 6	251..273	CDD:410628	5/21 (24%)
		TM helix 7	285..310	CDD:410628	7/29 (24%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	329..349		5/16 (31%)