Protein Alignment Rh6 and Opn5

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: XP_038939470.1
• Gene: Opn5 / 316259
• RGDID: 727869
• Length: 533
• Species: Rattus norvegicus
• Alignment Length: 350
• Identity: 91/350 - (26%)
• Similarity: 142/350 - (40%)
• Gaps: 78/350 - (22%)

  Fly    49 IIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTW 113
            :.||.:.|:|.:|..||..|:|:.:..|....|:.:..:|||..|..:.....|..:::.|...|
  Rat    35 VAGFYLTIIGILSTFGNGYVLYMSSRRKKKLRPAEIMTINLAVCDLGISVVGKPFTIISCFCHRW 99

  Fly   114 IMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRY---CVIVKG--MARKPLTATAAVLRLMVVWTI 173
            :.|.|.|..||..|..|||.|:.:||.::.|||   |.:..|  :.||     .|.:.|.|:|..
  Rat   100 VFGWFGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICYLSYGVWLKRK-----HAYICLAVIWAY 159

  Fly   174 CGAWALMPLFGWNRYVPEGNMTACGTDYFAKDWW-------NRSYIIVYSLWVYLTPLLTIIFSY 231
            ...|..|||.|...|.||...|:|     ..|||       .:.:|:....:..|.|...|:|||
  Rat   160 ASFWTTMPLVGLGDYAPEPFGTSC-----TLDWWLAQASGGGQVFILSILFFCLLLPTAVIVFSY 219

  Fly   232 WHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAK---------------------- 274
            ..|:..|.:..|         .||.. :|....|..:|:||.|
  Rat   220 AKIIAKVKSSSK---------EVAHF-DSRIHSSHVLEVKLTKGLVRADSSPESLPRSVFSTAEP 274

  Fly   275 ---------------VALTTISLWFFAWTPYTIINYAGIFESMHLSPLS-TICGSVFAKANAVCN 323
                           ||:...:.:..||.||.:::....|...:..|:. ::..::.||:.|:.|
  Rat   275 INCHVLSISHSRVSTVAMLICAGFLIAWIPYAVVSVWSAFGRPNSIPIQLSVVPTLLAKSAAMYN 339

  Fly   324 PIVYGLSHPKYKQVLREKMPCLACG 348
            ||:|        ||:..:..|...|
  Rat   340 PIIY--------QVIDYRFACCQTG 356

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	88/338 (26%)
		TM helix 1	49..75	CDD:320207	9/25 (36%)
		TM helix 2	82..108	CDD:320207	5/25 (20%)
		TM helix 3	120..150	CDD:320207	14/32 (44%)
		TM helix 4	161..181	CDD:320207	5/19 (26%)
		TM helix 5	208..237	CDD:320207	8/28 (29%)
		TM helix 6	267..297	CDD:320207	10/66 (15%)
		TM helix 7	306..331	CDD:320207	8/25 (32%)
Opn5	XP_038939470.1	7tmA_Opsin5_neuropsin	34..353	CDD:320202	89/345 (26%)
		TM helix 1	35..61	CDD:320202	9/25 (36%)
		TM helix 2	68..95	CDD:320202	5/26 (19%)
		TM helix 3	106..136	CDD:320202	13/29 (45%)
		TM helix 4	149..167	CDD:320202	5/17 (29%)
		TM helix 5	196..226	CDD:320202	8/29 (28%)
		TM helix 6	245..312	CDD:320202	10/66 (15%)
		TM helix 7	322..347	CDD:320202	9/32 (28%)