Protein Alignment Rh6 and opn1sw2

DIOPT Version :9

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 369
• Species: Drosophila melanogaster
• Sequence 2: NP_571267.1
• Gene: opn1sw2 / 30435
• ZFINID: ZDB-GENE-990604-40
• Length: 354
• Species: Danio rerio
• Alignment Length: 333
• Identity: 83/333 - (24%)
• Similarity: 156/333 - (46%)
• Gaps: 36/333 - (10%)

  Fly    45 MWFGIIGFV--IAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMF-PPVVL 106
            ::.|:..|:  :.|.||   |.|.:.:......|.||:..|..:||||.|:  :..::| ..|..
Zfish    43 VFMGMSAFMLFLFIAGT---AINVLTIVCTIQYKKLRSHLNYILVNLAISN--LWVSVFGSSVAF 102

  Fly   107 NGFYGTW-IMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMARKPLTATAAVLRLMVV 170
            ..||..: :.||..|::.|...::.|.||:||:.::|.:|:.||.|.:.........|:...::.
Zfish   103 YAFYKKYFVFGPIGCKIEGFTSTIGGMVSLWSLAVVALERWLVICKPLGNFTFKTPHAIAGCILP 167

  Fly   171 WTICGAWALMPLFGWNRYVPEGNMTACGTDYFAKD--WWNRSYIIVYSLWVYLTPLLTIIFSYWH 233
            |.:..|..|.||.||:||:|||...:||.|::..:  :.|.||::....:.:..|..||:|.|..
Zfish   168 WCMALAAGLPPLLGWSRYIPEGLQCSCGPDWYTTNNKFNNESYVMFLFCFCFAVPFSTIVFCYGQ 232

  Fly   234 IMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPYTII----- 293
            ::..:....||..:.|              .::..|.::.|:.:..:..:...|.||.|.
Zfish   233 LLITLKLAAKAQADSA--------------STQKAEREVTKMVVVMVFGFLICWGPYAIFAIWVV 283

  Fly   294 -NYAGIFESMHLSPLSTICGSVFAKANAVCNPIVYGLSHPKYKQVLREKMPCLACGKDDLTSDSR 357
             |....|:..    |:|| .|...||:.|.||::|.|.:.:::..:.:.:......:|:.:|.|:
Zfish   284 SNRGAPFDLR----LATI-PSCLCKASTVYNPVIYVLMNKQFRSCMMKMVFNKNIEEDEASSSSQ 343

  Fly   358 TQATAEIS 365
            ....:.::
Zfish   344 VTQVSSVA 351

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	80/301 (27%)
		TM helix 1	50..74	CDD:320207	6/25 (24%)
		TM helix 2	83..105	CDD:320207	7/22 (32%)
		TM helix 3	121..143	CDD:320207	6/21 (29%)
		TM helix 4	165..181	CDD:320207	3/15 (20%)
		TM helix 5	209..232	CDD:320207	6/22 (27%)
		TM helix 6	273..295	CDD:320207	5/27 (19%)
		TM helix 7	306..331	CDD:320207	11/24 (46%)
opn1sw2	NP_571267.1	7tm_1	62..313	CDD:278431	72/271 (27%)
		7tm_4	<129..331	CDD:304433	55/220 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG48050
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X120
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.920