Protein Alignment Rh6 and opn1lw1

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: NP_001300644.1
• Gene: opn1lw1 / 30413
• ZFINID: ZDB-GENE-990604-41
• Length: 357
• Species: Danio rerio
• Alignment Length: 343
• Identity: 93/343 - (27%)
• Similarity: 165/343 - (48%)
• Gaps: 45/343 - (13%)

  Fly    32 VDPYW-YQWPPLEPMWFGIIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFM 95
            :.|.| |.   :..:|.    |.:.:..|.:   |.:|:......|.||.|.|..:||||.:|
Zfish    44 IAPRWVYN---VATVWM----FFVVVASTFT---NGLVLVATAKFKKLRHPLNWILVNLAIAD-- 96

  Fly    96 MMFTMFPPV--VLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMARKPL 158
            :..|:|...  |:|.|:|.:|:|..:|...|...|:.|..::||:|:|:::|:.|:.|.......
Zfish    97 LGETLFASTISVINQFFGYFILGHPMCIFEGYTVSVCGIAALWSLTVISWERWVVVCKPFGNVKF 161

  Fly   159 TATAAVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTACGTDYF--AKDWWNRSYIIVYSLWVYL 221
            .|..|...::..|....||...|:|||:||.|.|..|:||.|.|  ::|...:||::|..:...:
Zfish   162 DAKWASAGIIFSWVWAAAWCAPPIFGWSRYWPHGLKTSCGPDVFSGSEDPGVQSYMVVLMITCCI 226

  Fly   222 TPLLTIIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFA 286
            .||..||..|  |...:|.|  |:.:|.|          :::.::..|.:::::.:..|..:.|.
Zfish   227 IPLAIIILCY--IAVYLAIH--AVAQQQK----------DSESTQKAEKEVSRMVVVMIFAYCFC 277

  Fly   287 WTPYTIIN-YAGIFESMHLSPLSTICGSVFAKANAVCNPIVYGLSHPKYK----QVLREKMPCLA 346
            |.|||... :|.........||:....:.|||:..:.||::|...:.:::    |:..:|:
Zfish   278 WGPYTFFACFAAANPGYAFHPLAAAMPAYFAKSATIYNPVIYVFMNRQFRVCIMQLFGKKV---- 338

  Fly   347 CGKDD--LTSDSRTQATA 362
               ||  ..|.|:|:.::
Zfish   339 ---DDGSEVSTSKTEVSS 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	83/298 (28%)
		TM helix 1	49..75	CDD:320207	4/25 (16%)
		TM helix 2	82..108	CDD:320207	9/27 (33%)
		TM helix 3	120..150	CDD:320207	10/29 (34%)
		TM helix 4	161..181	CDD:320207	4/19 (21%)
		TM helix 5	208..237	CDD:320207	9/28 (32%)
		TM helix 6	267..297	CDD:320207	7/30 (23%)
		TM helix 7	306..331	CDD:320207	8/24 (33%)
opn1lw1	NP_001300644.1	7tmA_LWS_opsin	39..330	CDD:320209	86/311 (28%)
		TM helix 1	52..78	CDD:320209	5/32 (16%)
		TM helix 2	85..112	CDD:320209	10/28 (36%)
		TM helix 3	123..153	CDD:320209	10/29 (34%)
		TM helix 4	164..186	CDD:320209	5/21 (24%)
		TM helix 5	213..243	CDD:320209	9/31 (29%)
		TM helix 6	258..288	CDD:320209	7/29 (24%)
		TM helix 7	298..323	CDD:320209	8/24 (33%)