DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh6 and GPR12

DIOPT Version :10

Sequence 1:NP_524368.5 Gene:Rh6 / 41889 FlyBaseID:FBgn0019940 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_005279.1 Gene:GPR12 / 2835 HGNCID:4466 Length:334 Species:Homo sapiens


Alignment Length:370 Identity:79/370 - (21%)
Similarity:139/370 - (37%) Gaps:102/370 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RDGRNLSLAESVPAEIMHMVDPYWYQWPPLEP-------MWFGIIGFVIAILGTMSLAGNFIVMY 70
            ||..:.:.||::.|.:...|       |.:||       .|    ..|:...||:....|.||:.
Human    14 RDYLDAAAAENISAAVSSRV-------PAVEPEPELVVNPW----DIVLCTSGTLISCENAIVVL 67

  Fly    71 IFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTWIMGPFLCEL--YGMFGSLFGCV 133
            |...:..||.|..:.:.:||.:|.:....:     :..|...:::.....:|  .|:..:.|. .
Human    68 IIFHNPSLRAPMFLLIGSLALADLLAGIGL-----ITNFVFAYLLQSEATKLVTIGLIVASFS-A 126

  Fly   134 SIWSMTLIAYDRYCVIVKGMA-RKPLTATAAVLRLMVVW--TICGAWALMPLFGWN--------- 186
            |:.|:..|..|||..:...:. ....|.|...:.|:::|  :||  ..|:|:.|||         
Human   127 SVCSLLAITVDRYLSLYYALTYHSERTVTFTYVMLVMLWGTSIC--LGLLPVMGWNCLRDESTCS 189

  Fly   187 --RYVPEGNMTACGTDYFAKDWWNRSYIIVYSLWVYLTPLLTIIFSYWHIMKAVA--AHEKAMRE 247
              |.:.:.|......          |::.:::|.:.|         |..|.|.|.  ||:.|::.
Human   190 VVRPLTKNNAAILSV----------SFLFMFALMLQL---------YIQICKIVMRHAHQIALQH 235

  Fly   248 Q--AKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFA--WTPYTIIN------YAGIFESM 302
            .  |....|.:.:.               |:...|.|..||  |.|:|:.:      |..|:...
Human   236 HFLATSHYVTTRKG---------------VSTLAIILGTFAACWMPFTLYSLIADYTYPSIYTYA 285

  Fly   303 HLSPLSTICGSVFAKANAVCNPIVYGLSHPKYKQVLREKMPCLAC 347
            .|.|         |..|::.||::|...:.:.::.|     ||.|
Human   286 TLLP---------ATYNSIINPVIYAFRNQEIQKAL-----CLIC 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh6NP_524368.5 7tmA_photoreceptors_insect 48..338 CDD:320207 65/317 (21%)
TM helix 1 49..75 CDD:320207 7/25 (28%)
TM helix 2 82..108 CDD:320207 3/25 (12%)
TM helix 3 120..150 CDD:320207 9/31 (29%)
TM helix 4 161..181 CDD:320207 6/21 (29%)
TM helix 5 208..237 CDD:320207 5/28 (18%)
TM helix 6 267..297 CDD:320207 9/37 (24%)
TM helix 7 306..331 CDD:320207 6/24 (25%)
GPR12NP_005279.1 7tmA_GPR12 45..312 CDD:320627 66/321 (21%)
TM helix 1 46..72 CDD:320627 8/29 (28%)
TM helix 2 79..104 CDD:320627 4/29 (14%)
TM helix 3 113..143 CDD:320627 9/30 (30%)
TM helix 4 155..175 CDD:320627 6/21 (29%)
TM helix 5 194..223 CDD:320627 6/47 (13%)
TM helix 6 244..274 CDD:320627 9/44 (20%)
TM helix 7 280..305 CDD:320627 8/33 (24%)

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