| Sequence 1: | NP_524368.5 | Gene: | Rh6 / 41889 | FlyBaseID: | FBgn0019940 | Length: | 369 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_663358.1 | Gene: | Rho / 212541 | MGIID: | 97914 | Length: | 348 | Species: | Mus musculus |
| Alignment Length: | 338 | Identity: | 90/338 - (26%) |
|---|---|---|---|
| Similarity: | 168/338 - (49%) | Gaps: | 23/338 - (6%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 34 PYWYQWPPLEPMWFGIIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMF 98
Fly 99 TMFPPVVLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMARKPLTATAA 163
Fly 164 VLRLMVVWTICGAWALMPLFGWNRYVPEGNMTACGTDYFA-KDWWNRSYIIVYSLWVYLT-PLLT 226
Fly 227 IIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPY- 290
Fly 291 TIINYAGIFESMHLSPLSTICGSVFAKANAVCNPIVYGLSHPKYKQVLREKMPCLACGKDDLTSD 355
Fly 356 SRTQATAEISESQ 368 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rh6 | NP_524368.5 | 7tmA_photoreceptors_insect | 48..338 | CDD:320207 | 77/292 (26%) |
| TM helix 1 | 50..74 | CDD:320207 | 4/23 (17%) | ||
| TM helix 2 | 83..105 | CDD:320207 | 8/21 (38%) | ||
| TM helix 3 | 121..143 | CDD:320207 | 7/21 (33%) | ||
| TM helix 4 | 165..181 | CDD:320207 | 3/15 (20%) | ||
| TM helix 5 | 209..232 | CDD:320207 | 6/23 (26%) | ||
| TM helix 6 | 273..295 | CDD:320207 | 3/22 (14%) | ||
| TM helix 7 | 306..331 | CDD:320207 | 7/24 (29%) | ||
| Rho | NP_663358.1 | Rhodopsin_N | 3..37 | CDD:313611 | 4/12 (33%) |
| 7tmA_MWS_opsin | 38..317 | CDD:320208 | 77/292 (26%) | ||
| TM helix 1 | 39..65 | CDD:320208 | 4/25 (16%) | ||
| TM helix 2 | 72..99 | CDD:320208 | 8/26 (31%) | ||
| TM helix 3 | 110..140 | CDD:320208 | 12/29 (41%) | ||
| 'Ionic lock' involved in activated form stabilization. /evidence=ECO:0000250|UniProtKB:P02699 | 134..136 | 0/1 (0%) | |||
| TM helix 4 | 151..173 | CDD:320208 | 5/21 (24%) | ||
| TM helix 5 | 200..230 | CDD:320208 | 7/29 (24%) | ||
| TM helix 6 | 245..275 | CDD:320208 | 4/29 (14%) | ||
| TM helix 7 | 285..310 | CDD:320208 | 7/24 (29%) | ||
| Interaction with SAG. /evidence=ECO:0000250|UniProtKB:P02699 | 330..348 | 3/15 (20%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S6219 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X120 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.860 | |||||