Protein Alignment Rh6 and Rrh

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: NP_001396782.1
• Gene: Rrh / 20132
• MGIID: 1097709
• Length: 379
• Species: Mus musculus
• Alignment Length: 339
• Identity: 80/339 - (23%)
• Similarity: 143/339 - (42%)
• Gaps: 55/339 - (16%)

  Fly    49 IIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTW 113
            :|...:.:.|..|:..|.:|:.||...|.||||:|..::||||:|..:....:|....:..:|:|
Mouse    27 VIAAYLIVAGITSILSNVVVLGIFIKYKELRTPTNAVIINLAFTDIGVSSIGYPMSAASDLHGSW 91

  Fly   114 IMG-----------------------PFLC-------------------ELYGMFGSLFGCVSIW 136
            ..|                       |.:|                   ::|......||.|||.
Mouse    92 KFGHAGCQFQGRNDRQVTGCLYTCLVPHVCNAGGAKRRAVDLLKLTLQMDIYAGLNIFFGMVSIG 156

  Fly   137 SMTLIAYDRYCVIVKGMARKPLTATAAVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTACGTDY 201
            .:|::|.|||..|......:.:|....:..::..|.....|||||:.||..|.|:.....|..::
Mouse   157 LLTVVAMDRYLTISCPDVGRRMTTNTYLSMILGAWINGLFWALMPIIGWASYAPDPTGATCTINW 221

  Fly   202 FAKDWWNRSYIIVYSLWVYLTPLLTIIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSK 266
            ...|....||.::..:..::.||..:.:.|:|:       .:::|..|.....|.|....||::
Mouse   222 RNNDTSFVSYTMMVIVVNFIVPLTVMFYCYYHV-------SRSLRLYAASDCTAHLHRDWADQA- 278

  Fly   267 AIEIKLAKVALTTISLWFFAWTPYTIINYAGIF-ESMHLSPLSTICGSVFAKANAVCNPIVYGLS 330
                .:.|:::..|.::..||:||:|:.....| ....:.|...|...:|||::...||.:|..:
Mouse   279 ----DVTKMSVIMILMFLLAWSPYSIVCLWACFGNPKKIPPSMAIIAPLFAKSSTFYNPCIYVAA 339

  Fly   331 HPKYKQVLREKMPC 344
            |.|:::.:.....|
Mouse   340 HKKFRKAMLAMFKC 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	79/331 (24%)
		TM helix 1	49..75	CDD:320207	7/25 (28%)
		TM helix 2	82..108	CDD:320207	7/25 (28%)
		TM helix 3	120..150	CDD:320207	12/48 (25%)
		TM helix 4	161..181	CDD:320207	4/19 (21%)
		TM helix 5	208..237	CDD:320207	6/28 (21%)
		TM helix 6	267..297	CDD:320207	7/29 (24%)
		TM helix 7	306..331	CDD:320207	8/24 (33%)
Rrh	NP_001396782.1	7tmA_Peropsin	26..347	CDD:320201	79/331 (24%)
		TM helix 1	27..53	CDD:320201	7/25 (28%)
		TM helix 2	60..87	CDD:320201	7/26 (27%)
		TM helix 3	98..170	CDD:320201	13/71 (18%)
		TM helix 4	183..201	CDD:320201	4/17 (24%)
		TM helix 5	228..258	CDD:320201	6/36 (17%)
		TM helix 6	275..305	CDD:320201	9/34 (26%)
		TM helix 7	315..340	CDD:320201	8/24 (33%)