Protein Alignment Rh6 and Opn3

DIOPT Version :9

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 369
• Species: Drosophila melanogaster
• Sequence 2: NP_034228.1
• Gene: Opn3 / 13603
• MGIID: 1338022
• Length: 400
• Species: Mus musculus
• Alignment Length: 314
• Identity: 88/314 - (28%)
• Similarity: 154/314 - (49%)
• Gaps: 28/314 - (8%)

  Fly    40 PPLEPMWFGIIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSD-----FMMMFT 99
            |...|..:..:..::..|..:.:.||.:|:.:::....||||:::|:|||:..|     |.:.||
Mouse    32 PLFSPTAYERLALLLGCLALLGVGGNLLVLLLYSKFPRLRTPTHLFLVNLSLGDLLVSLFGVTFT 96

  Fly   100 MFPPVVLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMARKPLTATAAV 164
             |...:.||    |:.....|...|..|||||.|||.::|::||:||..:|..   :.:..:.|.
Mouse    97 -FASCLRNG----WVWDAVGCAWDGFSGSLFGFVSITTLTVLAYERYIRVVHA---RVINFSWAW 153

  Fly   165 LRLMVVWTICGAWALMPLFGWNRYVPEGNMTACGTDYFAKDWWNRSYIIVYSLWVYLTPLLTIIF 229
            ..:..:|....|||..||.|||||:.:.:...|..|:.:||..:.|:::...|...:.|:..|..
Mouse   154 RAITYIWLYSLAWAGAPLLGWNRYILDIHGLGCTVDWRSKDANDSSFVLFLFLGCLVVPVGIIAH 218

  Fly   230 SYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPYTIIN 294
            .|.||:.:|    :.:|      .|..|:..:..|....|.|:||:......::...|.||.:..
Mouse   219 CYGHILYSV----RMLR------CVEDLQTIQVIKMLRYEKKVAKMCFLMAFVFLTCWMPYIVTR 273

  Fly   295 YAGIFESMHL-SPLSTICGSVFAKANAVCNPIVYGLSHPKYKQVLREKMPCLAC 347
            :..:....|| :|..:|...:|||::.|.||::|...:.|:::.|.:    |.|
Mouse   274 FLVVNGYGHLVTPTVSIVSYLFAKSSTVYNPVIYIFMNRKFRRSLLQ----LLC 323

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	83/295 (28%)
		TM helix 1	50..74	CDD:320207	4/23 (17%)
		TM helix 2	83..105	CDD:320207	9/26 (35%)
		TM helix 3	121..143	CDD:320207	10/21 (48%)
		TM helix 4	165..181	CDD:320207	4/15 (27%)
		TM helix 5	209..232	CDD:320207	4/22 (18%)
		TM helix 6	273..295	CDD:320207	5/21 (24%)
		TM helix 7	306..331	CDD:320207	9/24 (38%)
Opn3	NP_034228.1	7tm_1	65..307	CDD:278431	77/259 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910