DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh6 and LOC1273519

DIOPT Version :10

Sequence 1:NP_524368.5 Gene:Rh6 / 41889 FlyBaseID:FBgn0019940 Length:363 Species:Drosophila melanogaster
Sequence 2:XP_061502465.1 Gene:LOC1273519 / 1273519 VectorBaseID:AGAMI1_006107 Length:478 Species:Anopheles gambiae


Alignment Length:308 Identity:79/308 - (25%)
Similarity:141/308 - (45%) Gaps:28/308 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 AESVPAEIMHMVDPYWYQWPPLEPMWFGIIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMF 85
            |.::.::...::.|:.|....:...:.|..||.:          |..|:.:......|.||.|:.
Mosquito    26 AAAINSDHQELMAPWAYNGAAVTLFFIGFFGFFL----------NIFVIALMYKDVQLWTPMNII 80

  Fly    86 VVNLAFSDFMMMFTMFPPVVLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIV 150
            :.||..|||.:.....|..:.:.....|:.|..:|..||.|.||.|..||.::|:::|:|:|:|.
Mosquito    81 LFNLVCSDFSVSIIGNPLTLTSAISHRWLYGKSICVAYGFFMSLLGIASITTLTVLSYERFCLIS 145

  Fly   151 KGMARKPLTATAAVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTACGTDYFAKDWWNRSYIIVY 215
            :..|.:..:...|.|.::.:|:...|....|||||..||.|....:|..::.::.....||||..
Mosquito   146 RPFAAQNRSKQGACLAVLFIWSYSFALTSPPLFGWGAYVNEAANISCSVNWESQTANATSYIIFL 210

  Fly   216 SLWVYLTPLLTIIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALTTI 280
            .::..:.||..||:||.:|:       ..||:.:.::.    |.:.|::      ::..:....|
Mosquito   211 FIFGLILPLAVIIYSYINIV-------LEMRKNSARVG----RVNRAER------RVTSMVAVMI 258

  Fly   281 SLWFFAWTPYTIINYAGIFESMHL-SPLSTICGSVFAKANAVCNPIVY 327
            ..:..|||||.|......|....| .|...:..::.||::...|||:|
Mosquito   259 VAFMVAWTPYAIFALIEQFGPPELIGPGLAVLPALVAKSSICYNPIIY 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh6NP_524368.5 7tmA_photoreceptors_insect 48..338 CDD:320207 76/281 (27%)
TM helix 1 49..75 CDD:320207 4/25 (16%)
TM helix 2 82..108 CDD:320207 7/25 (28%)
TM helix 3 120..150 CDD:320207 13/29 (45%)
TM helix 4 161..181 CDD:320207 4/19 (21%)
TM helix 5 208..237 CDD:320207 11/28 (39%)
TM helix 6 267..297 CDD:320207 7/29 (24%)
TM helix 7 306..331 CDD:320207 7/22 (32%)
LOC1273519XP_061502465.1 None

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